Silurus meridionalis (southern catfish): 124378888
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Entry
124378888 CDS
T08004
Symbol
si:dkeyp-117b8.4
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124378888 (si:dkeyp-117b8.4)
04121 Ubiquitin system [BR:
smeo04121
]
124378888 (si:dkeyp-117b8.4)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
124378888 (si:dkeyp-117b8.4)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
124378888 (si:dkeyp-117b8.4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
Motif
Other DBs
NCBI-GeneID:
124378888
NCBI-ProteinID:
XP_046694658
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Position
25:complement(12812033..12816027)
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AA seq
889 aa
AA seq
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MEFPGRRRPSLGTPTLRRRMDRMVPFSERRTSKVWDHYTQLSIHRVECNHCKRQLSFHNS
TTSMREHLGRKHSIRDGAVPPPNTADVPNPSGLHQHLAESTLLNNRFPTSNAAADVPTGS
FQPVVPVIVKEEQHEELSVEAGEAKHNCTTFVPGSAGGVGTSNANSLPSQDLEQNYRFSP
DDLHTTLNNSVGSNNNGNRICSDKRAGLFTDLILEMVYRDLQPFSVVGERGFKLLLSCLE
PNYPIPSPSLLGNLLWDRYHNFKQCLQQHLRTGLAPRCLAICTEHWRSVEGCGVEGSGQF
YLTVSAHFVDSNWQLARCVLDTRPIPEYKGNTNNSGPSKFAYILKAVLSEFHLPESYVFC
VVYDTPWGMECRRQGSMTLDQDYQQQFPGPSHAPMQSLPEGWEPILCAGEALKICVQEGL
YVETVRQALADARGIVLHFQHNVNAAAALNQKAEAANKGAARLVLDDPGRWATAIDMCER
LLELKWVVSSVLEEQKAAPNLADHQWRLLHELVPVLRTVRIAAAFLSEDINASISSLMPC
LQGVSRILGQNMAECRCPVVRGVMERIRAGMEKRWRLSDEESLLDSPAVLSSFLDPRFKE
MRFLSPHARSKLHDKVKELLSVQAYRDDIEVDQDIDRGLEVRENETAVEPAVMGLDDQLP
IPAVASLDSPESCASCAEEGDGIELQQNENFGAVSSPEHMNENIILTSPSKAMTGRKNAA
NVAGLSSALTCDKQLTPQMRITPVPQSMYDLLLGEDPTERMPEIQQQLENYIAEPLCKRS
LSPLYWWRNKEHRFPAVARLARKYLSIPATAIPADRAFAPRESPVAHRRAMLGPKHLDQV
LFLHQNCDYVEQLKGGLSGHRENERNSNLSGNQSRDSLYQTLVSYDNKV
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccaggtcgaaggcggcctagtcttggcactccgaccctgaggagaagaatg
gatcgcatggtccctttctcagaacgtcggacatccaaagtgtgggaccactacacccag
cttagtatacatcgagttgagtgtaaccactgcaagaggcagctgtcctttcacaacagc
accacctcgatgagagagcacttgggacggaaacacagcattcgtgacggagcggtccca
cctccgaacacagccgatgtcccaaacccgtccgggttgcatcaacacctggctgagtcc
actttacttaataacaggttcccaacatctaatgcggcagcagacgtgcctacggggtct
tttcagccggtagtacctgttattgttaaagaggagcagcatgaggaactatcagtcgag
gcaggtgaggccaaacataactgcacgacatttgtgcctggatccgcaggaggagtaggc
acgtcaaatgctaattcacttcccagccaggacttggaacaaaattacaggttttctcca
gatgaccttcacaccacgctcaacaacagtgtcggcagcaacaacaatggcaataggatt
tgcagtgataagcgagctggacttttcacagatcttatcttggaaatggtttatagggac
ctgcaacctttctcagtggtaggagagagaggatttaagctcttgcttagttgccttgaa
ccaaattatcccattccatcaccttctttgcttgggaatcttttgtgggatcgataccac
aatttcaagcaatgccttcagcagcatcttcgaactggccttgctccccgctgtctggcc
atttgcactgaacactggcgctctgtggaagggtgtggggttgagggaagtggccagttc
tacctcacagtcagtgcacattttgttgactctaactggcagctggcccgctgtgtttta
gatactcgtccaataccagaatacaaaggcaacaccaacaacagtgggccttctaagttt
gcatacatattaaaagccgttctgtcagaattccaccttcctgagagttatgtgttctgt
gttgtttatgacactccctggggtatggagtgcaggcggcagggaagcatgacacttgat
caggactatcagcagcaatttcctggacccagtcatgctcctatgcagtcccttccagag
ggctgggaaccaattctttgtgcaggggaggctctcaaaatctgtgtccaagagggactt
tatgtagagacagtcagacaggcgcttgcggatgctcggggcattgttctgcacttccaa
cataatgttaacgctgcagcagctctaaatcagaaagcagaggctgccaataaaggtgca
gcacggctggttctggatgacccaggacgctgggccacagccattgacatgtgtgaaaga
ctgttggagcttaaatgggtagttagctcggtgctggaagagcaaaaggctgcacctaat
ttggctgatcatcagtggcgtttattacacgaattagtgccggtgctaagaactgtacgc
attgcagcagctttcctgagcgaggacatcaatgcttcgatttcttctttaatgccatgt
cttcaaggtgtgtctcgaatcctggggcagaacatggccgagtgcaggtgccccgtggtc
aggggcgtcatggaaaggatccgtgctggaatggagaagcgatggagactgagtgacgag
gaatctttgcttgacagtcctgctgtactgtcatcgttcctggacccgagatttaaggag
atgcgatttctcagcccgcatgcccgcagtaagctgcatgacaaagtcaaagagctgtta
tctgttcaggcttacagagacgacattgaggtggaccaagatatagaccggggtttggaa
gtgagagagaatgagactgcagtggaacccgctgttatgggattggatgaccaattgcca
atccccgcagtagcatcattggattcccctgagtcatgtgcctcatgcgcagaagaaggt
gacggcatcgaacttcagcagaatgagaattttggagctgtctcatctccagaacacatg
aatgaaaatattattctgacatcaccttccaaagcgatgactgggcgtaaaaatgcagcg
aacgtggctggactgtcatctgcactaacatgtgataagcagctcacccctcaaatgcga
ataacccctgttcctcaaagcatgtatgacctccttctaggagaggatcctactgaacga
atgcctgaaatccagcagcagctggagaattacatagcagagcctctgtgcaaacgtagc
ctttcgcctctttactggtggcgtaacaaagagcaccgttttcccgcagtggcccgactg
gcacgaaaatatctttccatcccagctactgctattcctgctgatcgtgcttttgcacca
agggaatcgcctgtggcccacaggagagccatgctagggcccaaacatcttgaccaagta
ttgtttcttcatcagaactgtgattatgtagaacagcttaagggtggactttcaggacac
cgagagaatgaacgtaacagtaatctgagtgggaaccaaagtagggacagtctgtatcag
actttagtgtcctatgataataaggtttaa
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