Silurus meridionalis (southern catfish): 124378896
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Entry
124378896 CDS
T08004
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124378896 (ythdc1)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124378896 (ythdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
124378896
NCBI-ProteinID:
XP_046694672
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All DBs
Position
25:3753812..3764812
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AA seq
717 aa
AA seq
DB search
MAVDRRDDKDGELNVLEDILTDAPDQDDELYNPESEHDLNDKKGSKRKNERGDSHDAKRL
RSSGHSTRQLVKRSVSSSRAIGKKVISMRGRHHPDDFYEDRRNHSGRGRAPRTDLSKGHS
RDHHRRIKPLMPELNQKLRRTSEESLGRVSRSSKDEEEAQSEEYASEQETGSSAGSSEGN
RSDCEEEEVMEDEDDEGEKGPDDEEEEEDVEGEEGEDEDEDYELEDGDQQEGNEQNDYDT
RSEASESQSESVSFSEGESVHSASGSEASDKERKEKKHARGISPIVFDRSGSSASESCTG
SEKKHEKLSSSVRAVRKDQTSKLKYVLREARFFLIKSNNHENVSLAKAKGVWSTLPVNER
KLNAAFRSARSVILVFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMNAKMLGGVFKI
DWICRRELPFTKSAHLTNSWNEHKPVKIGRDGQEIETNCGLQLCMLFPPDESIDLYQVIH
KMRHKRRTHSEPRSRGRPPHREPAPRDLGRHRPEEYDMHNRKRPRIDYPPEFPQRPGFMQ
DPRNQPVDRRFSGVRRDVFLNGSYNDYMREFHHSIGPPPPWQGMIISVPLKAPYPGMDQP
PHHPYYQHHPPPPQAHPPYSGHHPMPHEARFREKRVVRSFSSSLHDYDMRVDDFLRRTQA
VVSGRRSRPRERERQRERERPRDARRERERERGRERDRNRDRIRDRDREKERGRYRR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgataggcgagacgacaaagatggagagcttaatgttctggaggatatcttg
accgatgctccagatcaagatgacgagctctacaaccctgaaagtgaacatgacctgaac
gacaagaaaggttccaagcgaaagaacgaacgtggggacagccacgatgcaaagcgactg
aggtcttctggccactccaccaggcagttagttaagaggtcagtatcatccagtagagcc
attgggaaaaaggtgatcagcatgagaggcagacaccaccctgatgacttctacgaagac
aggaggaaccattctggcagagggcgagctccccggactgatctgtccaaaggacacagc
agagaccaccatagaaggatcaagccactgatgccagaactgaatcagaagctgaggagg
acgagtgaagagagcctgggccgggtcagccgttcctcgaaagacgaggaagaagcacag
tcggaagagtacgcttcagagcaggagacgggtagttccgcaggctcctctgaaggcaac
cgctctgactgtgaggaagaagaggtgatggaggatgaggatgatgaaggagagaagggc
ccagacgatgaagaggaggaagaggatgttgagggagaagaaggagaagatgaggatgaa
gactatgagctggaggatggagaccagcaggaagggaacgagcagaacgactacgacaca
cgcagcgaagcaagcgagtcacagtcagagtctgtgtccttttcagagggcgagtcggtg
cactccgcctcaggctctgaggcttcagataaggaaagaaaagagaagaagcacgctaga
gggatatcaccaatcgtttttgatagaagtggaagctcagcttcagaatcatgcacaggg
tccgaaaagaagcacgagaagttgtcatcctccgtacgtgccgtgagaaaagatcaaacc
agcaagctgaaatacgtgctgagagaggctaggttctttctaatcaagagcaacaaccat
gagaatgtttctcttgccaaagcaaagggagtatggtcaaccctgcctgtgaacgagaga
aagttgaacgcggcgttccgttcggctagaagcgtcatccttgttttttcggtcagggaa
agcggtaaatttcaaggttttgctcgactatcatctgagtctcatcatggaggttctccc
atccactgggtcctgcctgcaggcatgaacgctaagatgcttggcggagtcttcaaaatc
gactggatatgcaggcgggagttaccttttacaaagtcagcacaccttaccaattcctgg
aacgaacacaagcctgtaaagatcggacgcgatggacaggagatcgagacgaactgtggc
ctacagctgtgcatgctcttccctccggatgagagcattgacttgtatcaggttattcac
aaaatgcgccacaagaggaggacgcactcggagcctcgatcccggggccgtcccccgcac
agagagcccgccccccgagacctgggaaggcatcgtccagaggaatatgacatgcacaac
aggaagcgaccccggattgactatcctcccgagttcccccagagaccaggttttatgcaa
gacccacgcaaccagcctgtggacaggcgattttctggtgtaaggagagatgttttcctc
aatggctcgtacaatgattacatgcgggagttccatcacagcattgggcctccacctcca
tggcaagggatgattatttctgttcccctgaaggcaccatatccgggaatggatcagcct
cctcaccacccatattaccaacaccatcctcccccacctcaggctcacccgccctactct
ggtcatcaccctatgccccatgaggcacgtttcagggagaagagggtcgttcgttctttc
tcctccagtctgcacgattacgacatgcgcgtggacgacttcctgcgacgcacccaggcg
gtggtgagcggccgcagaagccggcccagagagcgcgagcgccagagagaacgcgaacga
ccaagagacgcccggcgagagcgtgaaagagagagaggccgcgaacgtgaccgtaacaga
gatcgcatcagagaccgtgaccgtgagaaagaaagagggcgctatcgcagataa
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