KEGG   Silurus meridionalis (southern catfish): 124378912
Entry
124378912         CDS       T08004                                 
Symbol
zgc:55461
Name
(RefSeq) beta-tubulin family protein
  KO
K07375  tubulin beta
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04145  Phagocytosis
smeo04517  IgSF CAM signaling
smeo04540  Gap junction
smeo04814  Motor proteins
smeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    124378912 (zgc:55461)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    124378912 (zgc:55461)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    124378912 (zgc:55461)
  09142 Cell motility
   04814 Motor proteins
    124378912 (zgc:55461)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124378912 (zgc:55461)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smeo03036]
    124378912 (zgc:55461)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:smeo04812]
    124378912 (zgc:55461)
   04147 Exosome [BR:smeo04147]
    124378912 (zgc:55461)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     124378912 (zgc:55461)
Cytoskeleton proteins [BR:smeo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    124378912 (zgc:55461)
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124378912 (zgc:55461)
  Exosomal proteins of colorectal cancer cells
   124378912 (zgc:55461)
  Exosomal proteins of bladder cancer cells
   124378912 (zgc:55461)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 124378912
NCBI-ProteinID: XP_046694712
LinkDB
Position
25:9195138..9197251
AA seq 445 aa
MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFRRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEELA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggaaatcgttcacatgcaggctggtcagtgtgggaatcaaattggtgcaaagttt
tgggaggtgatcagcgatgaacacggaatcgacccgactggcacctaccatggtgacagc
gacctgcagcttgagaggattaatgtatattacaacgaagcttcgggtggaaagtatgtt
cctcgggctgttctcgtggacttggaaccagggaccatggactctgtaagatctggtcct
ttcggacaaattttcagaccagacaacttcgtttttggtcagagtggggctggtaacaac
tgggccaaaggccattatactgaaggtgctgagttggtggactctgtgctggatgttgta
cgtaaggaggctgagagctgtgactgcctacagggcttccagcttactcactccctgggt
gggggcactggttcaggcatgggtacgctgcttatcagtaagattcgcgaggagtatcct
gaccgcatcatgaacacattcagtgttgtgccttctcctaaagtctctgatactgtggtg
gaaccctacaatgccactttgtctgtgcatcaactggtggagaacactgatgagacatac
tgcattgacaatgaagctctttatgacatctgtttccgcactttgaagctcacaactcct
acatatggtgacctcaaccatcttgtctctgccacaatgagtggtgttaccacctgcctc
cgttttcctgggcagctaaatgctgacctgcgaaaactggctgtcaacatggtgcccttc
cctcgtctgcacttctttatgcctggttttgccccactcaccagcagagggagccagcag
taccgtgctctcaccgtacccgaattaacacagcagatgtttgatgccaagaatatgatg
gcagcatgtgaccctcgccacggtcgctacctgactgtggctgctgtctttcggggccgc
atgtctatgaaagaggtggatgagcagatgcttaatgtgcagaacaaaaacagcagctat
tttgtagagtggatccccaacaatgtcaaaacagctgtatgtgacatcccacccagaggg
cttaagatggctgccacctttattggcaacagcacagccatccaggagctgttcaggcgc
atttctgagcaatttacagccatgttcaggagaaaggccttcctgcattggtacacagga
gaaggaatggatgaaatggagttcactgaagcagagagcaacatgaatgaccttgtgtct
gagtaccagcagtaccaggatgccacagctgaagaggagggtgagtttgaggaagaggca
gaagaggagttggcttaa

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