Silurus meridionalis (southern catfish): 124378912
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Entry
124378912 CDS
T08004
Symbol
zgc:55461
Name
(RefSeq) beta-tubulin family protein
KO
K07375
tubulin beta
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04145
Phagosome
smeo04540
Gap junction
smeo04814
Motor proteins
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124378912 (zgc:55461)
09144 Cellular community - eukaryotes
04540 Gap junction
124378912 (zgc:55461)
09142 Cell motility
04814 Motor proteins
124378912 (zgc:55461)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124378912 (zgc:55461)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124378912 (zgc:55461)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124378912 (zgc:55461)
04147 Exosome [BR:
smeo04147
]
124378912 (zgc:55461)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
124378912 (zgc:55461)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
124378912 (zgc:55461)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124378912 (zgc:55461)
Exosomal proteins of colorectal cancer cells
124378912 (zgc:55461)
Exosomal proteins of bladder cancer cells
124378912 (zgc:55461)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
124378912
NCBI-ProteinID:
XP_046694712
LinkDB
All DBs
Position
25:9195138..9197251
Genome browser
AA seq
445 aa
AA seq
DB search
MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFRRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEELA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatcgttcacatgcaggctggtcagtgtgggaatcaaattggtgcaaagttt
tgggaggtgatcagcgatgaacacggaatcgacccgactggcacctaccatggtgacagc
gacctgcagcttgagaggattaatgtatattacaacgaagcttcgggtggaaagtatgtt
cctcgggctgttctcgtggacttggaaccagggaccatggactctgtaagatctggtcct
ttcggacaaattttcagaccagacaacttcgtttttggtcagagtggggctggtaacaac
tgggccaaaggccattatactgaaggtgctgagttggtggactctgtgctggatgttgta
cgtaaggaggctgagagctgtgactgcctacagggcttccagcttactcactccctgggt
gggggcactggttcaggcatgggtacgctgcttatcagtaagattcgcgaggagtatcct
gaccgcatcatgaacacattcagtgttgtgccttctcctaaagtctctgatactgtggtg
gaaccctacaatgccactttgtctgtgcatcaactggtggagaacactgatgagacatac
tgcattgacaatgaagctctttatgacatctgtttccgcactttgaagctcacaactcct
acatatggtgacctcaaccatcttgtctctgccacaatgagtggtgttaccacctgcctc
cgttttcctgggcagctaaatgctgacctgcgaaaactggctgtcaacatggtgcccttc
cctcgtctgcacttctttatgcctggttttgccccactcaccagcagagggagccagcag
taccgtgctctcaccgtacccgaattaacacagcagatgtttgatgccaagaatatgatg
gcagcatgtgaccctcgccacggtcgctacctgactgtggctgctgtctttcggggccgc
atgtctatgaaagaggtggatgagcagatgcttaatgtgcagaacaaaaacagcagctat
tttgtagagtggatccccaacaatgtcaaaacagctgtatgtgacatcccacccagaggg
cttaagatggctgccacctttattggcaacagcacagccatccaggagctgttcaggcgc
atttctgagcaatttacagccatgttcaggagaaaggccttcctgcattggtacacagga
gaaggaatggatgaaatggagttcactgaagcagagagcaacatgaatgaccttgtgtct
gagtaccagcagtaccaggatgccacagctgaagaggagggtgagtttgaggaagaggca
gaagaggagttggcttaa
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