Silurus meridionalis (southern catfish): 124378961
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Entry
124378961 CDS
T08004
Symbol
dnm1a
Name
(RefSeq) dynamin-1a isoform X1
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
smeo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124378961 (dnm1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124378961 (dnm1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124378961 (dnm1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124378961 (dnm1a)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
124378961 (dnm1a)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
124378961 (dnm1a)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
124378961 (dnm1a)
RhoA-dependent endocytosis
124378961 (dnm1a)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124378961 (dnm1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
PH
MMR_HSR1
Ldh_1_N
DUF5130
Motif
Other DBs
NCBI-GeneID:
124378961
NCBI-ProteinID:
XP_046694808
LinkDB
All DBs
Position
25:2817829..2876586
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AA seq
862 aa
AA seq
DB search
MGNRGMEDLIPLVNRMQDAFASIGQNANLDLPQIAVVGGQSAGKSSVLENFVGKDFLPRG
SGIVTRRPLVLQLINSPTEFAEFLHCKGKKFTDFDEVRQEIEAETDRATGQNKGISPVPI
NLRVYSPNVLNLTLVDLPGMTKVPVGDQPADIEHQIKEMLMQFVTKDNCLLLAVSPANSD
LANSDALKIAKEVDPQGLRTIGVITKLDLMDEGTDARDILENKLLPLRRGYIGVVNRSQK
DIDGRKDITAAMAAERKFFLSHPAYRHLADRMGTAYLQKALNQQLTNHIRDTLPGLRSKL
QSQLLSIEKEVEEYKNFRPDDPSRKTKALLQMVQQFSVDFEKRIEGSGDQIETYELSGGA
RINRIFHERFPFELVKMEFDEKELRKEISYAIKNIHGIRTGLFTPDMAFETIVKRQIAKI
KAPCQKCVDMVISELVNTVRQCTKKLAQYPMLREEMERIVTQHIRDREGRTKEQVMLLID
IELAYMNTNHEDFIGFANAQQRSSQMSKKKAAGNQGQDEIMVIRKGWLTINNISIMKGGA
KEYWFVLTAESLSWYKDDEEKEKKYMLQVDNLKFRDVEKSFMSSKHIFALFNTEQRNVYK
DYRQLELACESQEEVDGWKASFLRAGVYPERVVEKDKSDASEENGSDGFMHSIDPQLERQ
VETIRNLVDSYMGIVNKTIRDLMPKTIMHLMIINTKEFINAELLAQLYSCGDQNTLMEES
PEQAQHRDEMLRMYHALKEALCIIGDISTSTVSTALPPPVDDSWLQVQRIGSGGRSPATS
PTPQRRAPPGPPGRPVSRGSAPGLPAAGGPPLPSRPGASPDPFGGPPPQVPSRPNRAPPS
VPSRPSRGSPSRPESPLPSSDS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccggggaatggaagatctcatcccgctggtgaaccggatgcaggacgcgttc
gcctccatcggacagaatgcgaacttggacctgcctcagatcgcagtggttggcggccag
agcgcggggaagagctccgtcctggagaactttgtcggaaaggacttccttccccgcggt
tcaggcatcgtcacacgccgccctctggtcctgcaactcatcaactcccccacagagttt
gcagagtttttgcactgtaaggggaagaagtttacagattttgatgaagtgcgtcaagag
atcgaagcagagacggatcgtgccactgggcagaataaaggcatctctccggtccctatt
aacctccgtgtctattcccctaatgtactgaacctgactctggtggatttgccgggaatg
accaaagtgccggtcggcgaccagccggcagacatcgagcaccaaatcaaggaaatgctt
atgcagtttgtgacgaaggataactgcctgctgctggctgtatcccctgctaactccgac
ctcgccaactctgatgccctaaaaatcgccaaagaagtggatcctcaaggtttgcgcacc
atcggcgtgatcaccaaactggatctgatggacgaaggaacggatgctcgagatattcta
gagaacaagctgttaccgctgcgccgaggctacatcggcgtggtgaaccgcagtcagaaa
gacatcgatgggaggaaggacatcactgcggctatggctgctgagaggaagttcttcctg
tcacatcctgcatacagacacctggcagaccgtatggggacagcttacctacaaaaagcg
ctcaaccagcaactaaccaatcatatccgagacacactgcccggactgcgcagtaaactc
cagagccagctgctatccatcgagaaagaggtggaggagtataagaacttccgcccagac
gacccgtctcgaaagaccaaggccttgttgcagatggtgcagcaattctctgtggatttt
gaaaagcgtatcgaaggctcaggtgatcagatcgagacttatgagctttcaggtggagcg
aggatcaaccgtatcttccacgaacgctttcctttcgaactggtcaagatggagtttgat
gaaaaagaactgcgcaaggagatcagctacgccatcaagaacattcatggcatcagaact
gggctcttcaccccggacatggcctttgagaccattgtgaaaaggcagattgcgaagatt
aaagcgccctgccagaaatgcgtggacatggtcatttctgagctagtcaataccgttagg
cagtgtaccaagaagcttgcccagtaccccatgctgcgagaggaaatggaaagaatcgtc
actcagcacatccgcgatcgtgagggtcgcaccaaggaacaggtgatgctgctgattgac
attgagctggcttacatgaacaccaaccatgaagatttcatcgggtttgccaatgcgcag
cagagaagcagccaaatgagcaagaagaaagcagctggcaaccaggggcaggatgagatc
atggtcatcaggaagggctggctgacgatcaacaacatcagtatcatgaaaggtggcgct
aaggagtactggtttgtgttaacagcggaatcgctctcctggtacaaggatgacgaggag
aaagagaagaagtacatgctgcaggtggacaacctgaagtttagagatgttgagaagagt
tttatgtccagcaagcacatctttgcactgtttaacactgaacagaggaacgtgtataaa
gactatcgtcagctggagttggcctgtgagagtcaggaggaagtggatggctggaaggcc
tcattcctcagagctggtgtttatccagagcgtgtggtggaaaaggacaagagcgatgcg
agcgaagagaacggctcagacggcttcatgcactccatagacccccagctggagaggcag
gtggagaccattcgcaacctggtggactcctacatgggcatcgtcaacaaaaccatccgt
gatctcatgcccaagaccatcatgcacctcatgatcatcaacacgaaggagttcattaat
gcggagttgcttgctcagctttattcctgcggtgatcaaaacactttgatggaggagtcg
cccgagcaggctcagcaccgggacgagatgctgcgcatgtaccatgcactcaaagaggcc
ctctgcataatcggagacatcagcaccagcacggtgtctacagctctgcctccacctgtt
gacgactcgtggctgcaggtgcagcgcattggttctgggggaaggtctccagctaccagt
cccacccctcagagacgagctcctccaggaccaccaggacgccctgtttctcgtggctct
gcaccaggactgcctgctgccggtgggcctcctttgccatctcgccccggggcgtctccg
gacccgtttggaggcccaccccctcaggtgccatctcggcctaaccgggccccgcccagt
gtgcccagccggccgagcaggggcagcccttcacgccctgagagccctcttccctcatct
gattcctaa
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