Silurus meridionalis (southern catfish): 124378969
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Entry
124378969 CDS
T08004
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124378969 (arhgef28a)
Membrane trafficking [BR:
smeo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124378969 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
C1_2
PHD
PHDvar_NSD
DUF7588
DUF848
Motif
Other DBs
NCBI-GeneID:
124378969
NCBI-ProteinID:
XP_046694846
LinkDB
All DBs
Position
25:10956459..11051330
Genome browser
AA seq
1818 aa
AA seq
DB search
MVLGSVTLGLLGCRCVWLSRLECNGLMELNRDEVPVYGQVEVCAVLQDPQCVQEKAEYYV
VLKGSHIHHVTTAQRKQESHLLSFIVPGHNVAEKVLVQLYCWEDSSSYIQPTLMSEELSL
EYKWDTLQEVADLLLSYPENLTSSTHVDIQRKLCLEDSIQPSQNNSQLTGKHETSRLDEE
SLELGQRLNELNEDSGSHNPEENPDCWRHFHPDPGEGCKLEPCGPVDVKITQAVSNMHSF
LQWNNQNPQKSQALRNIETPLHIAVRLGLYHLTLFYLQQSGGQEMATQPNEEGHVATELA
QSRGHAATISALAHPEACKEENPVWMSQIWADELHLLRSCQLTSSSVLTIKHQIIFDPQM
SIQLYREKHGYLGSHVQVDALTEVEEKSKQNQTDETSEAGLTSRTNIGDCVLLDSVFEEQ
LVLSVDEDEENHTPSNTEKLSSPSGSSSFQLQPTDITAARLTAMLNRTGKNDEQNRKLNN
DLMTNGPSATVTPPAVKVEGTKEQRTFSHPFSPSLAHFSPISSPGLVLDRFLRSSCHNEH
DNHNAGSPTESYEISPNLVALEMDSEEEEDDFLMRKPLPQISSENKDSGDKQDSFNPSSD
LSCIRTHSASSDCNHSSQKDLDPGVRLRSYSYSSPKINLLSPRSSRDAPRPPADLSNDGA
LTNNSSGSRSLLQALSLSKSLSLLNPVKQRAASLTEQAQEKRELWFRRRTQSADDESSVE
LADSLQHLTLSEFLKEIEEEGWDKYIIPSKSEPEKYKVSRTFSFIKSRMYSTRSKKGKAK
EKEVKEKQSNGHQFAAGPVLGTSACEVCDKPATGKETLHCSNCAVSIHKGCKDSTAQCLK
KVQDKYTVSMMKARASTLPQNFVLRESTQSSQVSSSASLPMMSPRSRIDTAPLSRSVPLV
PEWLAESPEGDNDSSSWRSHGQSEELLQTVESSTSTDSSLVEDAVDSPLQNSFPMDALYL
EAESWSLAVESQFCQKQEKRTIKRQDVIYELMHTELHHLQTLTIMSEVFRRGMREEVGLD
AEAIGRIFPCLDELLVLHRDFLSAMTERRSNSMQPDNEKNYLIHHVGDILVQQFSQENAE
NMKRVYGEFCSRHNEAVSFFKELQQQNKRFQLFIKQQSSNSLVKRREIPECILLVTQRIT
KYPVLLERILQYTEEGTQEHADISRALLLVRELISAVDVRVSEREQSQWLSDVLGRMESK
SLVRLKSGAAFRKHDMTNGRTLLHHGPLLWKTATGRLKDVLALLLTDLLVFLQEKDQKYV
FAAVDQKCPVISLQKLIVREVANEERGMFLISASYSGPEMYEVHAASKDERNAWMRLIRE
AVVICHEKEEDTASESEEERKAAEASQKIQKLQESLCGHDQLICSSLEEKLHIYAELAAM
VGHRDLSPEPKLLVRPNTEELPNAAILLNAALKEAESLKEALSFPCNSTSCTGPLLAPEE
QNASDSTVQLEAPPPTPSSLSVPAEEEPQAVDAVRSEEEESKGEDSLELQLCVQSCASDN
HNRHLKVCQSVQSLTQLLYSLQALVTIQDSRYEVRRLLLLLLSSSAHQRISQGSLQEQER
QREAERRRQELARAARERQRWARECQAQQLRSEERETELAQREQQCHEEVQRLQRQREEL
EEQQQEYQQSLERLREGQRSVEKEREKLEVQQRMMERWRHECQPSLPSTNIKLEGHQGTG
DETKSFHRGLHGGLDEDGSIFVNEAAFLTPSMNNRHLHHYQHQQNQHNTHLLPGYENSPS
AQNSLNSLLALSNHTHPTISTQDELWSEVVAPAIHTTRTAGAVGPGIYQGDAPSVPQAFV
SMDTENQDPDGEEKIVYL
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atggttttgggtagcgttacactcggactgctcggctgcagatgtgtctggttgagcaga
ttagagtgtaatggtctgatggagctgaacagagatgaggtccctgtttatggtcaggtg
gaagtgtgtgcagtgctgcaggatcctcagtgtgttcaggaaaaggccgaatactatgtg
gtattaaaaggctcgcatattcaccatgtcactacagcacagaggaagcaagagagccat
ttactgagcttcatcgtacctggtcacaatgtggcagaaaaggtcttggtgcagttgtac
tgctgggaagatagtagcagctacattcagccaaccctgatgtcagaggaactatcattg
gagtacaaatgggacactctacaggaagtagctgatctactcctgtcttaccccgaaaac
cttacttccagcacgcatgtggatatccagaggaaattatgccttgaagatagtatccag
ccaagccagaacaattcacaattgactggaaagcatgagacctcaagactagatgaagaa
agtttagagcttggacaaagactcaatgaactgaacgaagactcagggagtcacaatcca
gaagaaaatcctgattgctggaggcattttcatccagatcctggtgaaggatgcaaactg
gagccatgtggcccagttgatgtgaaaatcacacaggcggtttcgaacatgcactctttt
ttacagtggaacaaccaaaacccacagaaatcacaagctctccgcaacatagagacccct
ctgcacatagctgtgcgtttgggtttgtatcacctcaccctcttctaccttcaacagtct
ggtggtcaagagatggcaacacagcccaatgaagaaggacacgttgctactgaactggcc
caaagtagaggtcatgcagcaactataagtgcattagcacaccctgaagcttgcaaagag
gagaacccagtgtggatgtcacagatctgggctgatgaattgcaccttctcaggtcatgc
cagctaaccagttcttccgtcttgacaatcaaacaccaaattattttcgatccacagatg
agcatccagctctatagggaaaaacatggatatcttggaagccatgtgcaggtggatgca
ctcactgaggtggaagagaaaagcaaacagaaccagacagatgagacaagtgaagcaggt
ctcaccagccggacaaacataggggattgtgttcttctggacagtgtttttgaagaacaa
cttgttctttctgtggacgaagacgaagagaatcacacgccatctaatacagagaagttg
tcctctccttcaggttccagctctttccagcttcagcctacagacatcactgctgccaga
ctcacagccatgctgaaccgcactggaaagaacgatgagcagaacagaaagttaaacaac
gacttaatgacaaatggcccctcagccaccgtcacaccacctgctgtcaaagtcgaagga
acgaaagagcagcgtacattctctcatcctttctctccatccctcgctcatttctccccc
atctcttcaccaggactggttttggaccgcttccttcgcagcagctgccacaatgaacac
gacaatcacaatgcaggctcgcctacagaatcttatgaaattagcccaaatctcgtggcc
ttggaaatggacagtgaagaggaggaggatgatttcctgatgaggaagcccctcccacag
atatcatctgaaaacaaggacagtggagataaacaggacagctttaatccatcctcagac
ctcagctgcattcgcactcactctgcttcctcggactgtaaccattcctcccaaaaggac
ttggatccaggagtgcgtctgcgttcatattcctattcctcacccaaaatcaacctgctg
tccccgcgctccagccgagacgctcctcgtcctcctgctgacctcagcaacgatggcgcc
cttaccaacaacagcagcggcagcagatctctcctacaggctctgtctctatctaaatct
ctgtcactgctcaatcctgttaaacagcgtgcagcgagtttaactgagcaggcacaagaa
aaaagggaattatggttccgtagacggactcagtcagctgatgacgagtccagcgtcgag
ctggctgattcactccagcacctcacactctccgaattcctcaaagaaattgaagaagag
ggatgggataaatacattattccttccaagtctgagcctgagaagtacaaagtcagccgc
accttcagtttcattaaaagccgaatgtacagcacacgcagcaagaagggaaaagcgaaa
gagaaagaagtaaaggaaaaacagagcaatggacaccaatttgcagcaggccctgtgctt
gggacttcggcttgtgaggtctgtgacaaacctgctactgggaaggaaacgctacactgc
agcaattgtgctgtgagcatccataagggttgtaaagattccacagcacaatgccttaag
aaagtgcaggacaaatacacagtttctatgatgaaggccagagcatccaccctccctcaa
aactttgtattgcgtgaaagcacccagtcttctcaggtatccagttcagcctctctccct
atgatgagtccacggagcaggatagacacagcccctttatcccggagtgtccctctagtg
ccagagtggcttgcagagagcccagagggagacaatgactcctcctcctggagatctcat
ggccagtcagaggagctcctgcagaccgtggaatcttctacgtccactgactcctccctt
gttgaagatgcagtggactctccactacagaacagttttccgatggacgctctgtatttg
gaggcagagtcgtggagtctagcggtggagtcacagttctgccagaagcaggaaaaacgc
accatcaagagacaggatgtcatctacgagttaatgcacaccgagctgcaccacctgcaa
acgctgaccatcatgtcggaggtgttcaggcgaggcatgcgggaggaggtgggcttggat
gcagaggcaatcggtcggatatttccttgcttggacgagctgctcgtcctgcatcgagac
ttcctttctgccatgacggagcggcggagtaactcaatgcagcctgacaatgagaagaac
tacctcattcaccatgtgggtgatatcctcgtgcaacagttctctcaggagaatgccgag
aacatgaagcgagtctacggcgagttctgcagccgccacaacgaagccgtcagcttcttc
aaggagctacagcagcagaacaaaagatttcaacttttcattaaacaacagagcagtaac
tcactggtcaagaggcgagagattccagaatgtattttgctagtgacgcagcgaattaca
aagtatccagtgcttttagagaggatactgcagtacacagaagagggcacacaggagcac
gccgatatctctagagcgctgttgctggtgcgagagttgatctcagcggtggatgtgaga
gtgagcgaacgggagcagagtcagtggctgagcgacgtgctcggccgcatggaaagcaag
agtttagtcagactgaagagcggtgctgccttccgtaagcacgacatgaccaatggccga
acgctgcttcaccatggcccgctgctttggaagacagccaccggcagacttaaagatgtg
ctggctctcctgctgaccgatctgctggtattcctccaggagaaggaccaaaaatatgtc
tttgctgctgttgaccagaaatgtccagtgatctccttgcagaagttgatagtgagggag
gtggctaatgaggagcgaggcatgttccttatcagtgcctcgtacagcggccccgagatg
tatgaggtgcacgcggcatccaaagacgagcgaaacgcctggatgaggctcatccgagaa
gccgtggtgatttgccacgagaaggaggaggacaccgcgagcgagtcagaagaagaacgc
aaagcagcagaagccagtcagaaaattcagaagctacaagagtcactctgcggtcatgac
cagctgatttgctccagcctggaggagaagctccacatctatgctgagcttgcagccatg
gtgggccacagagatctcagcccagaaccaaagctgctggtgcgccccaacacagaagag
ctccctaatgctgctattctgctcaatgctgctcttaaagaggcggagagtctgaaagaa
gcactgtcgttcccctgcaactccacctcctgcacaggtcccctgcttgctcctgaggaa
cagaacgcatctgactccaccgttcaactcgaggcccctcctcccactccatcttctctt
tcagttcctgctgaagaagagccccaagcagtggatgctgtacggagtgaggaagaagaa
tcaaaaggagaagacagtctcgaactccagctttgcgttcagagctgtgcaagtgacaat
cataacagacacctgaaggtgtgtcaaagtgtccagagtttgactcaactgctttacagt
ttgcaggccttggtcaccatccaggacagccgctatgaagtccgccgtctccttctcctc
ctcctgtcaagttctgctcaccagcggatatcccagggctccctacaggaacaggagcgc
cagcgggaggcagagcgtcggcggcaggagctggcacgggcggcacgagaacggcaaagg
tgggcacgcgagtgccaggcgcaacagctgcgttccgaagagcgcgagaccgagctggca
cagcgggaacaacagtgccacgaggaagtgcagagactgcagcgacaacgcgaggagctg
gaagagcagcagcaagagtaccagcagagcctggagagactgagggagggccagaggagt
gtggagaaagagagggagaagctggaagtgcagcagaggatgatggaaagatggagacat
gaatgccaacccagcctgcctagtacaaacattaagctggaaggtcatcaaggaacagga
gatgaaacaaaaagcttccatcgtggtcttcacggcggcttggatgaggatggctctatt
tttgtaaacgaagcagcttttctgacgccatccatgaataatcggcatcttcatcactac
cagcatcaacaaaatcagcataacactcacctacttccaggctatgagaattcacccagt
gcacagaacagtctgaattctctgctggctttgtccaatcatactcaccccaccatcagc
acgcaggacgagctatggagcgaagttgttgctccagcgatccataccaccaggacagca
ggagcggtggggccagggatttatcaaggtgacgccccctcggtgccacaggctttcgtt
tccatggataccgagaaccaagatcccgacggggaggagaaaatcgtgtatctctaa
DBGET
integrated database retrieval system
