Silurus meridionalis (southern catfish): 124378976
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Entry
124378976 CDS
T08004
Symbol
lrwd1
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124378976 (lrwd1)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
124378976 (lrwd1)
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Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
Beta-prop_EML_2
WD40
LRR_4
LRR_8
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
124378976
NCBI-ProteinID:
XP_046694875
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Position
25:complement(12940116..12946779)
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AA seq
797 aa
AA seq
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MADTKTHALTSLPSKFTARFSRENTKQRTEPGCTRESIMEKITEKVLLEKGLPKANKLEK
ITSINLSRMGLKNQDLPVALLNKLSSLEDLDLSGNMMQKLPARLFLPRLRLLNFSNNDLE
DVTSLAALSGLEELRLDDNLYLTVSDEHKVMFLLPNLKFLNGKDISATASHIRHVNSEIL
MKRVIGVWEKNFSLPDPPSSQSLKELEKKFVSAACFQVKYGPSSLNDYTKWRVEMIAKEY
LKSLTGPEKEEEEDMTLETLEKETGSPAKRKSHDTEETSDSEKSWKKRTLNPVATPEASA
RKSSQLTSAASVESSPRKSSRLQGTPQKAHPKEVSSPRCLRMKTPEASPGKSCRLQNTPK
KANVTEVTVTPTAMGVKKNLKAQLTTPKACSSTKAKNGIWKTTKYQVPKEPARLQPLHVL
QCHSKQDSREDFSTQLWACAFEPAHNNSNADAWSQSVATCGGETVCVIDCESGHVIKKYK
VPGEEFFTLAWTTVLMAREGGCARSCSILAAGGKRGMVKLIHPRANLAYGEFRASRRTIS
MLRFSPCQSSFLFTGAYDNKIIMWDIGGLDRDYNFKTSQLLVLETCSTPLQFCLPPHSPD
THLISGCDNGLYSFDIQLSKNIQKRTVEMEIVFPVYKKSNKKKNYRTIDGLSFLTEDIIA
SKSQMQGSIYLWSWSRTRAEKGRKKEVPAVILAELQWSNTEIPYLSLNTCPGFGYVVCGD
EQGRLWTYHITDAAKANFKSGKAVPATEVLGWPSLVRNGTGPIEGPSINSVAMDPELRYL
VALSDKNMVVIWRRESV
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccaagacccacgctctgacgtcacttccgtcaaagttcacggcgaggttt
tcccgggaaaacacgaagcaacgaactgaacccgggtgtacacgtgaaagcatcatggag
aagattactgagaaagtactgctggagaaaggtctacctaaagccaacaagctggagaaa
attaccagcatcaatctctctcgtatggggttgaaaaatcaggatctccctgtggctctg
ttgaataaactgtcctcgctggaggatttggatctttctggaaacatgatgcagaagctc
cctgcaagacttttccttcccaggctgcggcttctgaacttctccaacaacgacttggag
gatgtgacctcgctagcagccctgagcggcctggaggagttgcggctggatgacaattta
tatctcaccgtcagtgatgagcacaaagtgatgttcctcctgcccaatttgaagttcctg
aatgggaaggatatcagtgcgacggccagccacatccgccatgtgaacagcgagatcctt
atgaagcgggtgattggggtgtgggagaagaacttcagtctccctgatccaccatcttca
caaagcttaaaggagctcgagaaaaaatttgttagtgcggcttgctttcaggtcaaatat
ggccccagctctttgaacgactacaccaaatggagggtcgaaatgattgcaaaagaatat
ctcaagtcgctgactggtccagaaaaagaggaggaagaagacatgaccttggagactctt
gaaaaggagactgggtctcctgctaagagaaagagtcatgacactgaagaaacaagtgat
tctgaaaaatcctggaagaaaaggactctaaacccagtggccacaccagaggcaagtgca
cgcaaatcaagccagttaaccagtgccgcgtcagtcgagtccagtccgagaaaatcctca
cggctccaagggactcctcagaaagctcacccaaaggaggtctcgagcccacggtgtctg
agaatgaaaactcccgaagcgagtccgggaaaatcatgtcgcctgcaaaacaccccaaaa
aaagccaacgtgaccgaggtcacagtgacgcccactgccatgggagtgaagaaaaatcta
aaagctcagcttacgactccgaaagcatgtagctccaccaaggcaaaaaacggaatctgg
aaaacaactaaataccaggttccaaaggagccggcccgtctgcagccacttcacgtcctg
cagtgtcacagtaaacaggacagtcgggaggatttcagcacccaactgtgggcctgtgcc
tttgagcctgctcacaacaatagtaatgcagatgcctggtcacaatcagtggcgacttgt
ggaggggagacggtgtgtgtgatagactgcgagtctggtcacgtgataaagaaatacaag
gtccctggtgaggagttctttacactggcctggaccacagtattgatggcacgtgagggc
ggttgtgctcgatcgtgcagcatccttgccgcaggaggaaagaggggcatggtgaagctc
atccaccccagagccaacctggcatacggcgagtttcgtgccagccgccgaaccatatcc
atgctacgcttcagcccgtgccaaagcagcttcctattcactggtgcatatgataacaag
attatcatgtgggacatcggcggactggaccgggactacaacttcaaaaccagtcagctg
cttgtcctggagacctgctcgactccactgcaattctgtctgcctccccattccccagac
acgcacctcatctcaggctgcgacaacgggctttacagcttcgacatccagctcagcaag
aacatacagaagaggacagtggagatggagattgtatttcctgtgtacaagaaaagtaat
aagaagaagaactaccgcactattgatggactcagcttccttacagaggacattatagcg
tctaaaagtcagatgcagggctctatctacttatggagctggagtcgtacaagagcggaa
aaaggaaggaaaaaagaggtgcctgctgtgatcctggccgaactgcagtggtcgaacacc
gaaatcccatatttatctctaaacacctgccctggcttcggctacgtcgtgtgtggagat
gaacaaggcagactgtggacgtatcacatcacagacgctgcgaaggccaacttcaagagc
ggaaaagcagttcctgctacagaggtcctggggtggccatctctggtgcgaaatggaaca
ggccccatagaggggccgtcgatcaacagcgtcgccatggaccccgagcttcgttatttg
gttgccctaagtgacaagaacatggtggtcatttggagacgagaatctgtgtaa
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