Silurus meridionalis (southern catfish): 124379011
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Entry
124379011 CDS
T08004
Symbol
npas2
Name
(RefSeq) neuronal PAS domain-containing protein 2
KO
K09026
neuronal PAS domain-containing protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124379011 (npas2)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124379011 (npas2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
bHLH_IRO3
PAS_4
TED_2
Motif
Other DBs
NCBI-GeneID:
124379011
NCBI-ProteinID:
XP_046694954
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All DBs
Position
25:16289489..16318627
Genome browser
AA seq
848 aa
AA seq
DB search
MDKLSEFGVLCASSRGEWETSSCVDDFLDEDEKDRAKRASRNKSEKKRRDQFNVLIKELC
TMLQGQGHPRKMDKSTILQRTINFLQKQKEITVQTETCEIQQDWKPSFLSNEEFTQLMLE
ALDGFLIALRLDGNIVYVSDSVSSLIGHLPSDMVDQSILNFLPEREHAEVYKLLSANLLT
SDPISTDFLEGNETHVEFCCHLVRGNIDPKDVPTYEYVKFVGDFKFHNSVPASSCNGYEL
MFPRSLQTSLEEQMCLVATVRLVTPQFLKDLCIVDDPCDEFTSRHSLEWKFLFLDHRASP
IIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQCGKGKSCYYRFLTKGQQWIWLQTHY
YITYHQWNSKPEFIVCTHTVVSYAVVRAERRREYGLEETSDLCNNSVQGQEVSVDVCAPL
DALRDTISSARSASSHSSRKSTHTAPSDSASNSSVRYKESCTSSRHSASVATENSNRLSH
GASKTLIQRQASLEPPPPSPSDQASAMHQAACAGPPQPQLGVMHQLTEHLEKRRLILQND
IKSQQQELHHIKEKLQLANLQMLLQHPVHVDFPQQASAPNSQSGVLQHNNTHLTKPSHCT
SHTASSYTLHREQPSSSTTQQRLTQMQSVCVPVQTHTSLTMPIYSNPVMFSPSPGYHNTQ
DTHHTHHAQHIHHTQHTHRQADTDNGPDGQLRMLLNQSVQNMVPDCSGAPTSHCSTTIQQ
TKYLDQQMMASSLPVQQVSCNAVLVPSPVFTSPIMISHNSFISPQAPPTYTPSPQGNQQG
LHIQQHQQLFQMQPQGLIQSGPTQAFFHTTNIQPQSTVGYIQHQQLHQHQQHHISHSQSS
GYRNILPR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctttccgaatttggtgtcctttgtgcgtccagcagaggggaatgggaaact
agcagctgtgtggatgattttctggatgaagatgagaaagacagggctaaaagggcgtca
cggaataaatccgagaagaaaagacgagaccagttcaatgtgctcattaaggagctgtgc
accatgctgcagggccaaggccatccacgcaagatggacaagtctaccatcctgcagagg
accatcaacttcttgcaaaagcaaaaagagatcacagtgcagactgagacctgtgagatt
cagcaggactggaagccttcatttctcagcaacgaggagtttacccagttaatgctggag
gctttggatggtttcctgattgcactccggctggacgggaacattgtctatgtgtctgac
agcgtctcctctctcattgggcatttaccgtcagacatggtggaccaaagcatcctgaac
ttcctgcctgagcgtgaacatgctgaggtctacaagctgctctcagcaaacctgctcaca
agcgaccccatcagcaccgacttcctggagggcaatgagacccatgttgagttctgctgc
cacttagtccgagggaacatcgaccccaaagacgtgcccacgtacgagtacgtcaaattt
gtcggagacttcaagttccacaacagtgtgcctgcatcgtcatgtaacggctacgagctg
atgtttcctcgatcactgcagacctcactggaggaacagatgtgtttagtggctacagtc
agactggtcacacctcagttcctgaaggatttgtgcattgtggacgacccatgcgatgaa
ttcacatcgagacacagcctggaatggaagttcctgtttttagaccacagagcctccccc
atcatcggctacctgccatttgaggtgttggggacgtcggggtacgattattaccacgtg
gacgatctggagctcatcgctcagtgtcataaacagctgatgcagtgtggaaaggggaag
tcgtgttactatcgctttctgaccaaagggcagcagtggatctggcttcagacgcactat
tacatcacctaccaccagtggaactccaaacctgagttcatcgtgtgtacacacactgta
gtgagttatgctgtggtccgggcagaaaggaggagagagtacggtctagaggagacctct
gatttgtgcaacaattcagtacaggggcaggaggtgtctgtggatgtttgcgctcctttg
gacgcactgcgagacacgataagcagcgctcgatcagcttcttcacacagctcgcgcaaa
tccacacacactgcaccgtccgactcggcatcaaactcttcggtcaggtataaagaaagc
tgcacatcatcacgacattcagcatctgtagcaactgagaactcaaacaggctcagccac
ggagcatcgaagaccctgattcaaagacaggcctcattggagcctccgcccccctccccc
agtgaccaagcttcagccatgcaccaggcggcctgtgcaggtcccccccagcctcagtta
ggagtgatgcaccagctgacggagcacctggagaaacggcgcctcatcctgcagaacgac
atcaaaagccagcaacaggaacttcatcacatcaaagagaaacttcagctcgctaacctg
cagatgttgctgcagcatccggttcatgtggattttcctcagcaggcttctgctccaaac
agtcagtcaggagtcctgcagcacaacaacacacacctcaccaaaccctcacactgcaca
tcacacacagcgtcgtcttacacactgcaccgagagcaacccagcagctccactacacag
caaaggctaacgcagatgcaaagcgtgtgtgtcccggtccaaacacacaccagtctgaca
atgccgatttacagcaacccagtgatgttctcgccgagtccgggataccacaacacgcag
gacacacaccacacgcatcacgcacaacacatacatcacacccaacacacacaccggcaa
gcagacacagacaacgggcctgacggacagctgaggatgctgttaaaccagtcggtacag
aatatggttccagactgcagtggagcaccgacatcacactgcagcaccaccatccagcaa
accaaatatttggaccagcagatgatggcctcctctttgccggtgcagcaggtcagctgt
aatgctgttcttgtcccctcccctgtgttcacgtcaccaatcatgatctcccacaacagt
tttatcagtcctcaagccccgcccacttacacacccagcccccagggcaaccagcagggc
ctccacatccaacagcatcagcagctctttcagatgcagccacagggtctgattcagagt
ggcccgactcaggcctttttccacacaactaacatccaacctcaaagcactgtgggatac
atacagcaccaacaactacaccaacatcaacagcaccatatttcacattcacagtcgtca
ggttacagaaacattcttccacggtag
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