Silurus meridionalis (southern catfish): 124379023
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Entry
124379023 CDS
T08004
Name
(RefSeq) INO80 complex subunit D
KO
K11668
INO80 complex subunit D
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124379023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124379023
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
124379023
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC3H_KANSL2
zf-primase
Motif
Other DBs
NCBI-GeneID:
124379023
NCBI-ProteinID:
XP_046694974
LinkDB
All DBs
Position
3:19207781..19217613
Genome browser
AA seq
946 aa
AA seq
DB search
MYEGKHIHFSEVDNKPLCSYSPKLCKQRRLNGYAFCIRHVLEDKTAPFKQCEYVAKYNSQ
RCTNPIPKAEDRRYCNSHLQVLGFIPKKERKKKHDALDSVALNITVPSLALKASNGLDGL
PPSPPCTRLPPLALSSTHLFDPFAFYEEDVDGVESATRKNSVPKRKPASRLVLSQQGPRH
DADFPSPTSEQLTPVTVACTLPKSPHLPPPTPAALPAPPPPLQHAGHASFIQQGPSQALQ
CKTAPASTGASLVPTTPPSAGQQYRKTLHTSPSHPPAGAWECPQSRTITMRPTAFTAPPA
CLSRLQHLIQLCANRHKEHGDLFPHLGLDWSDESADEDEEEEDDERIPSLPQARRLQDGS
PQHHSVGEREEPRRSRLAQLCTYLQERYKHLCRQERAATRHTRYKYAFRKALLHAASKDP
DCTGELIQHLSKTSHMSSRHPVQQKVEKSVCTGSTKGQPCSNPSLPFTRHCFQHILLNRS
QQLFSSCTARFADGQQCSVPVFDITHQTPLCDEHAKKMDNFLRGDSNRRVQQQQQRRPRK
KTKPPALTKKHKKKRRKVVRRPQKPIPPALPQGNLPMPPTLTLPTHHASIRSPSTPELSA
DELPDDITTDIADIPNDLELNQEDFSDVLPRLPDDLQDFDLFEGKNGELLPTTEEAEELV
RALQAMGSYPDTLVCLNSMAELTPADDHRAMSVFSGSGVTVTAMGDLLNGRISSDNFPSL
ELEDNLLHHSADDHFPSSLSPQPPPATTSAPPAGSNRTLNERTFPHSALSKTEPTLPSSP
PGSHYSSDHVPSPYSDHISSPHSASYQTEPPLLLEVPLSGLPGAPRSSWSNLALSLTEPM
QFGNLLTQDTHLLSTSLSTPPSITHPPSAPSSSPPNSPHDLLSTSQPKLQLPQFSAAFGH
QLASHSGIPKDVQPSHSSTAPPTGFTSASATAAGANSAAPTFQQSK
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggggaaacacatacacttctcggaggtggacaataagcctttgtgctcatac
agcccaaaactctgcaagcagcgtagacttaatggatacgccttctgtatacggcatgtt
ttagaggacaagacagctccctttaaacaatgtgaatatgtggccaagtacaacagccag
cgatgcaccaaccccattcccaaagccgaggaccgcagatactgtaacagccacctgcaa
gtgctgggcttcatccccaagaaggagcgtaagaagaaacatgatgcgctggattctgta
gcattgaacatcaccgtgccctccctagctctcaaagcctctaatggcttagacggtttg
cctccttctccaccctgtacccgtctgcccccccttgccttatccagcacacacctgttt
gaccccttcgccttttacgaagaggacgtggatggagtggagagcgccacacgcaagaac
tctgtacctaagaggaagcctgctagtcggctggttctcagtcagcaagggccacgtcat
gacgctgactttccatcacccacttcagagcaattaacacccgtcacggtggcctgcaca
ctgcccaaatctccacatctaccaccaccaacaccagcagcactacctgcacctccccca
cctttgcagcatgctggtcacgcttcctttattcagcaggggccatcacaagctctgcaa
tgcaagacagcaccagcttcaacaggagcctccctggtgcccaccacaccaccctcagca
ggccagcagtatcggaaaaccctccacacttcccccagtcatccacctgctggcgcttgg
gagtgtccacagagccgcaccatcactatgcgacccactgcctttacagctccccctgcc
tgcctgtcaaggctacagcatcttatacagctctgtgcaaacagacacaaagagcatgga
gacctcttccctcatcttggactggactggtctgatgaaagtgctgatgaggatgaagaa
gaagaagatgatgagagaattccttcattgccccaggccaggaggctgcaggatgggagt
cctcaacaccattctgtgggtgaacgcgaggagcctcggcggtctcgtctggctcagctc
tgtacgtacctgcaggagcgctacaaacacttgtgtaggcaagagcgagctgccacacgg
cacacaagatacaaatacgctttcaggaaagctctgctccatgcagccagcaaagaccct
gactgcacaggggaactcatccagcatctcagcaaaacatcacacatgtccagcaggcat
ccagtacaacagaaagtggaaaaatctgtgtgcactggtagcaccaagggtcagccctgc
agcaacccatctctgcctttcacacgccactgcttccaacatatcctgctgaaccgttca
cagcagctcttttccagctgcacagcacgatttgctgatgggcagcagtgctctgtcccc
gtcttcgacatcacacaccagacacctctctgtgatgaacatgccaagaaaatggataat
ttcctacgtggggatagtaacaggcgggtgcaacagcagcagcagagacggccacgtaaa
aagaccaaaccaccagcgttgactaagaaacacaagaaaaagcggaggaaagtagtgcgc
cgtccccagaaacccattcctcctgcactaccacagggcaacctgcccatgccacccaca
ttgacactgcccacccaccatgccagcatcaggagcccctctacacctgagctcagcgca
gatgaacttcctgatgacatcaccactgatatcgcagacattccaaatgatctggagtta
aatcaggaggacttttctgacgtcctgcccagattgcctgatgacctacaggactttgac
ctgtttgagggtaagaatggcgagttgcttcccaccacagaagaggcggaggagctggtt
cgtgcgctgcaggcaatgggctcatatcctgacacgctggtttgtttaaactcaatggct
gaactgacaccagctgatgaccatcgtgccatgagtgtcttttctggctctggagtcacg
gtgacagccatgggcgatctcctaaacggccgaatatcatcggacaacttcccaagtctg
gagctggaggataatctcctccatcactcggcagatgatcatttcccttcatccctctct
cctcagccaccaccagccaccacctcagcgcctcctgcagggtcaaatcgtacactgaac
gagcgaacgttccctcactcggctctctctaaaaccgagcccacgctgccgtcctctcct
ccaggcagccattacagcagtgaccatgtgccgtctccttacagcgatcatatctcctcc
ccacactctgcgtcctaccagacagagcctcctctcctactggaggtgcctctcagcgga
ttaccaggcgctcctcgctcctcctggagcaacctcgccctttcccttacagaaccaatg
cagtttgggaaccttttgacacaagacactcatctcctctccacctctctgtccactcct
ccttccatcacacatccaccctctgctccctcctcctctcctccaaactcccctcatgac
cttctcagcactagccagcccaaactgcagctcccacaattcagtgcagccttcggtcat
cagcttgcctctcacagcggcatcccgaaagatgtacagcccagtcacagttccacagct
cctcctacggggttcacgagtgcaagtgccactgctgccggtgccaacagtgccgcaccc
actttccagcagagcaagtga
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