Silurus meridionalis (southern catfish): 124379039
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Entry
124379039 CDS
T08004
Name
(RefSeq) astrotactin-2-like isoform X1
KO
K24479
astrotactin
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124379039
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124379039
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
ASTN1_2_fn3
Annexin_2
ASTN_2_hairpin
MACPF
FXa_inhibition
cEGF
Motif
Other DBs
NCBI-GeneID:
124379039
NCBI-ProteinID:
XP_046695002
LinkDB
All DBs
Position
25:1929920..2292537
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AA seq
1307 aa
AA seq
DB search
MARSAARLVLLLLSLLLFLSLEDFLSGTVTGTGTAAGGPKPGSEKDAAAAAGACEVKTVT
VSTLPVLRESELSVGSGSAGAADSRLLLFVRSDVPGAVSVLDDLDNTALPYFTLEMSGTG
ADISQVHWKQQWLENGTLFFHVSMSSSEQLFQATQPTAREPSQGLHEHVHLLHISVMGGL
IALLLLILLFTLVLYTRQRWCRRRRAPQKSASTEATHEIHYIPSVLLGPPQSRDGFRTPR
AHQHGSVIGMAIRETPILDDCDCEDDEQPGQLLDGKIHMDEDFCSQGTRSMDSLGKGGFD
ANSKHSLDNRVIDSQHESVEALVQRIKDSFRTNATMEITHFQNATHSSSTSRKRGPIQNR
GGVFGPQECSSSDVDDENQLKFYTEHRVGRRRSKGCPQSPMSKTTLTLITVSTCVLAMVY
GSQTSCPLTVKVTLHVPEHFVADGSSFVVSMGSYLDVSNWLNPAKLTLYHQSNSSSQWVR
DYCGQRTIEPCEQLCDQDTGECSCLEGYSPDPEHTHLCIRTDWGRNEGPWPYSNLERGYD
LVTGEQAPEKIFRSSYSLGQGLWLPVSKSFVVPPVELSINPVASCKTDVLVTEDPGDIRE
EAMMSTHFETVDDLLASFGPVRDCSRDNGGCRKNFKCVSDRRLDSTGCMCPEGLRPMKDG
SGCYDYSVGTDCTDGFNGGCEQLCLQQLVPLPDDPTSNNVLMFCGCVQEYKLAADGRSCL
LLADNCEGPKCPKQDSRFNDTLFSEMLHGYNNKTQEVNLGQVFQMTFRDNNFIKDFPQLA
DGLMVIPLPVEEQCRGVLSEPLPNLQLLTGDAQFSEGMGYPMMQQWQVRSNLYKVKLSAI
TLSTGFSKVLKSLTADSTRDELLSFIQQYGSHYISEALYGSELSCNIYFPSKKVQQQLWL
QYQKEVTEQVSRRDLKAVPFITFLSDLMKTQLLSDDLVAGVEIQCQEKGSCPAACHLCRQ
VGRDSPSPLPALLDVSRSVPLFSLIQDNLTKEAFKSAAMSSYWCAGKGDVIDNWCRCDLS
AFGSDGLPNCSPLLQPLLRLSPHLEPSSTVVALEWIDVEPLIGYKVADYIIQHKRIEDPS
EAEIYTGEVLSLVDDLFSGLGSSCVVPGRKSGEHAHSQIYSLIFKCLEPDSLYKFTLYAL
DSRGSRSEASYVTVRTSCPIVDDSRAEEIADRVYNLYNGYTSGKEQQTAYNTLMEIPPPT
LYRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRVDRISLLCRSLLRSGYIQSRTES
MPYVMCRSEDMRLASSTWHSSLHETRLTCVEKILSVQRNIYGKSKLR
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggagtgcggcgcggctcgtcctcctcctcctctctctcctcctcttcctctcg
cttgaggacttcctgtccgggacggtgacggggaccgggaccgcggcgggaggaccgaag
cccggctcggaaaaggacgcggcggcggcggcgggcgcgtgcgaggtcaaaacggtgacg
gtgtccacgctgcccgtgctgcgcgagagcgagctgagcgtgggttccgggagcgcgggc
gcggcggactcccggctcctgctgttcgtgcggagtgatgtaccgggggccgtgtcggtg
ctggacgacctggacaacaccgcgctgccctacttcaccctcgaaatgtcggggacaggt
gccgatatctcgcaggtgcactggaagcaacagtggctggagaacgggacgctcttcttc
cacgtgtccatgagcagttcagagcagctgttccaggccacacagcccacagcacgagag
ccatcacagggcctgcacgagcatgtgcacctgcttcacatctccgtcatgggtggtctg
atcgctctcctcctcctcattcttctcttcactctggtcctgtacactcgtcagcgatgg
tgccggcgccgcagggctccacaaaaaagcgccagcactgaggccacccacgagatccac
tacattccttcagtcctgctcggaccaccgcagtccagagatggcttccggacgcctcgt
gcccaccagcacggctcggtcattggcatggccatccgtgagacgcccatcctggatgac
tgcgactgtgaagatgacgagcagcctggacagctcctggatgggaagattcacatggac
gaggacttctgcagccagggcactcgcagcatggatagtctgggaaaaggaggatttgat
gccaatagtaaacacagcctggataacagagtcatcgactcccagcacgagtccgtggaa
gctttagtgcagagaatcaaggatagtttccgtaccaatgccaccatggagatcacgcat
ttccaaaatgcaacacacagctcgtccaccagccgcaaacgaggaccgattcaaaacaga
ggtggtgtgtttggccctcaggagtgttccagctctgatgtggatgatgagaatcagctg
aaattctacacagagcaccgcgtaggcagacgccgcagtaaaggttgccctcagagcccc
atgagtaagaccactttgaccttgatcacagtgagcacctgtgtcctcgccatggtgtac
ggctcacagacctcctgcccactgaccgtcaaagtcacgctgcacgtccccgagcacttt
gtcgcagacggtagtagttttgtggtgagcatgggcagttacctggacgtatctaactgg
ctgaacccggccaaactgacactgtatcatcagtccaactcttcctctcagtgggtgcgt
gattactgcggccagaggaccatagagccctgtgaacagttgtgtgaccaggatacggga
gaatgcagctgcctggagggttattcgcccgaccctgagcacacgcacctctgcatccgc
accgactggggacggaatgaagggccgtggccgtactcaaacctggaacggggttatgac
ctggtgactggagaacaagctccagaaaagatcttcaggtcctcctacagtctgggccaa
ggcctttggctgcccgtcagcaaaagctttgtggtgccaccggtcgagctgtcaatcaac
cctgtcgccagctgcaagactgatgtcctcgtcacagaggaccctggggacatccgggag
gaggccatgatgtccacacactttgagacagtagatgatttgctggcatcattcggcccg
gtgagagactgctccagggacaacggtggctgcaggaagaactttaagtgtgtttccgac
agacggctcgattccacaggctgcatgtgtcctgaaggcttgcggcctatgaaggacgga
tcaggttgctatgactactctgtgggtacagactgtacggacggctttaatggtggctgt
gagcaactttgtcttcagcagctcgtgcccctgccagacgatcccacctccaacaacgtg
ctcatgttctgcgggtgtgtacaggaatacaagctggcagcagatggacgctcctgcctt
ctcttagctgataactgcgaaggccccaagtgtcctaaacaagactcgcgctttaatgac
acgctcttcagcgaaatgctgcacggctacaacaacaagacacaagaggtcaacctgggt
caagtgtttcagatgaccttcagggacaacaacttcattaaggattttcctcagctggct
gatggactgatggtgattcctctgccggtggaggagcaatgtagaggagtgctgtcagaa
cctctacctaacctgcagctccttacaggagacgcccagttcagtgaggggatgggatat
cccatgatgcaacagtggcaggtccggagtaacctctacaaggtcaagctcagtgccatc
actctatctacagggttctcaaaggttctaaagtctctgacggcagacagcacacgtgac
gagctcctgtcctttatccagcagtatggcagccattacatctccgaggccctgtatggc
tccgagctcagctgtaacatctacttccccagcaagaaggtgcaacagcagctctggctc
cagtatcagaaagaggtgactgagcaagtgagccgccgagacctgaaagccgtccccttt
atcaccttcctgtctgacctaatgaagactcagctgctgtctgatgacctggtggctgga
gtggagatccagtgtcaggagaagggcagctgccctgcggcgtgtcacctgtgcaggcag
gtgggcagagacagtcccagccctttgcctgcactgctggatgtcagccgttcagtacca
ctcttcagcctcatccaggacaacctcaccaaagaggccttcaagagtgccgccatgagc
tcatactggtgcgccggcaagggtgacgtcatcgataactggtgccgctgcgacctgagc
gcttttggcagcgacggcctgcccaactgcagccccctgctacagcccttattgaggttg
tctcctcacctcgagccctcaagcactgtcgtggcccttgagtggatagatgtggagcct
cttattggttacaaagtcgccgattacatcatccaacataagcgaattgaggacccatcc
gaagctgagatctacactggagaggtactgagtctggtggatgacctgttttctggattg
ggctcttcatgtgtggttcctggaagaaaaagtggagaacatgctcattctcaaatctac
tccctcatctttaagtgcctggaacctgatagcctctataagttcactctgtacgccttg
gacagtcgaggcagccggtctgaggcgagctacgtgacagtgcgcacttcctgtccgatc
gtggatgacagcagagcagaagagattgcagaccgggtttacaacctgtacaatggctac
acaagtggcaaagaacagcagacagcctacaacacgctgatggagattcctccacccaca
ctgtaccgtgtacaacaccattacaactcgcactacgagaagttcggggactttgtgtgg
cggagcgaggacgagctaggacccaggaaagctcaccttatcctaagacgagtggatcgg
atcagcctcctctgccgctctcttctccggagtggttacatccagagccggaccgagtcc
atgccgtatgtcatgtgcaggagtgaggacatgcgattggctagcagcacttggcacagc
tctctccatgagacacggctaacctgtgtggagaagatcctgtctgtccagcgcaatata
tacgggaagtccaaactccggtga
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