Silurus meridionalis (southern catfish): 124379058
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Entry
124379058 CDS
T08004
Symbol
rbm44
Name
(RefSeq) RNA-binding protein 44 isoform X1
KO
K25080
RNA-binding protein 44
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124379058 (rbm44)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Other domain-containing proteins
RRM domain-containing proteins
124379058 (rbm44)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
wHTH_TTC3
TTC3_9th
GlcNAc-1_reg
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
124379058
NCBI-ProteinID:
XP_046695056
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All DBs
Position
3:17353527..17364230
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AA seq
1021 aa
AA seq
DB search
MWCSPSVMVPVYLEPSARRVMWPVIPFEQHVWFATNDTVEYQEHCLSVDNGRKFLLCKSV
YDLVKISHFMELNDPKLLGWYFSLPAEDRKLMQEEGGLHQFLKQHPALEVHGHIVHLKQL
GVGNCQTFQAPEISMNLDGSRRVTFYGMLQCANCGTSCPSGAKKCRCCNTLLLNPEENVC
ISEDEKTLQLLPSSVREELNLIKAKGHVSKNDSLSSHQLNCIQRTSNNLSATQSNLLNRF
QQTEHPRMNNSDGKHFCQMWEEQVSCKVQDIGLFKDSSAQASISLDRELEMQDQNPSSDY
DQVSLLPDTNSGIPNLEKETLPEFYSFNSTTIEHTSAQLCDVTDTSMMATESRIEAFIGD
EPADCGADKITFHDSVSTLSNSSEWTDLTEDCHSLSNEDEPECEAEKFHSVIVEEASNST
DCIPCINPSCSASGQCTQEVVITHESYISSASPNDLNVKTTTPCEVSPFPPNVSQAVDVS
TEFRACFTATRATEITEDFFVKHCQDDSTDGDSCPVNRATIHTLTSDKNTVTDVYMSDLD
AICEEFGKFQMIEEELIHLKEEMARSGPDNVGGPRSEQQNGICGCGAISRAKRAELRLLA
LQFAMCQQHCWRRFHTSPQGETSLQRIEALPDSMSQTLIILEDNYLKMKRKILEGVPLDN
LKPLTVDTKRLKTVTCYRPSLIHETLIGDSLPELSFKRPSVLQDEGQTNQADVLKINITG
GGHLSKNLTTSQGQTLCDSATLSKTASSERSRDVPASSQQSADSIDTKLCTTKDINSSDA
WFDAKEEILCDSQICEDNQSGHIERRDSNQQQKVDASGMKDRCFLLCVSNLPNGVTERDL
LLWFAKYHASQVSLSNFSNTGVAIVSVRDAKDLEAAVREMNGRSIQGHTLHVEHIYTSPA
DRQATCKESHIQLSPAAHKPGFAGKGNNNVSRPLCCSLDKLTNICSTPTASGTCVPQHYG
TMGSFDTIMAQLSVSHPQMGRQRIVNALLQLQAKHHGVLSGLPLKDIVEMTSELLTRSTT
N
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgttctccttccgttatggtaccagtgtatttagagccaagcgcgcgcagggta
atgtggcccgttataccgtttgagcagcacgtttggtttgctactaacgacacggtcgag
tatcaggagcattgcctgtctgttgacaacggaaggaaatttttgttgtgcaagtctgtg
tatgatcttgtgaaaatcagccacttcatggagttgaatgatccaaagttgcttggctgg
tatttctctttacctgcagaagacaggaaactaatgcaagaagaaggagggctccatcaa
tttttgaaacaacatcctgctcttgaagtacatggacatattgttcatttaaaacagctt
ggcgtaggaaattgccaaacctttcaagcacctgaaatttccatgaatcttgatggatca
cgacgggttacattttatggcatgttgcagtgtgcaaattgtggcacaagttgtccatct
ggtgctaaaaagtgcagatgctgtaacactctgttgctaaacccagaagaaaacgtttgc
atatctgaggatgaaaagacacttcagctgctaccaagcagtgtacgagaggagctaaat
ctcataaaagccaaaggacatgtcagtaaaaatgattcactgagttctcatcagttgaac
tgcattcagaggacctccaataatttgtctgccacccaaagcaatcttttaaacagattc
cagcaaaccgagcatccaaggatgaacaacagtgatggcaagcatttttgtcaaatgtgg
gaggaacaagtgtcgtgtaaagtgcaggatatcggattgtttaaagattcttcagcacaa
gcaagcatttcacttgacagggagcttgagatgcaagaccaaaatccaagtagtgattat
gaccaggtatccctgttaccagacaccaattcaggtattcccaatttagaaaaggagact
ctgcctgaattttacagtttcaatagcaccacaatagagcacacatctgcacagttgtgt
gacgtcacggacacctctatgatggctactgaaagccgcattgaggcatttatcggtgat
gagcctgcagactgtggcgcagacaaaattacgttccatgattcagtatcaaccctcagc
aactcctcagagtggactgatctcacagaagattgccatagtctcagtaatgaggatgaa
ccagaatgtgaggcagagaagtttcatagtgtgattgtcgaagaagcctcaaattcaact
gactgtattccatgcattaatcccagctgttcagcatctggccagtgtactcaagaggtt
gtgattacacatgagagctacatttcttctgccagcccgaatgacctaaatgttaaaacc
acaacaccgtgtgaggtctctccttttccccccaatgtgagccaagctgtggatgtcagc
actgagtttagagcttgttttacagccacccgggcaacagaaatcactgaggacttcttt
gtgaagcattgccaagatgattccactgacggtgactcgtgtcctgttaaccgggcgaca
attcatacactcacttcagacaaaaacactgttactgatgtctatatgtctgacttggat
gctatttgtgaggaatttgggaaattccaaatgattgaagaagagctaattcatttaaaa
gaagaaatggcaagatctggtcctgacaatgtaggagggcccaggagtgaacaacagaac
ggtatttgtggatgtggtgccatttcacgtgctaaacgggccgagttgcgtctactggct
ctgcagtttgccatgtgccagcaacattgctggaggcgcttccacacatcaccacagggt
gaaacttcacttcagagaatcgaagcactgcctgattcaatgtcgcagaccctgattatc
ttggaggacaattacctcaagatgaagaggaagatactggaaggtgttcctttggataat
ctcaagcctcttactgtggacactaagagattaaaaactgtaacatgctacagaccatct
ttgattcatgagactttgataggtgacagtctgcctgagctttctttcaaaaggcccagt
gttcttcaagatgaaggtcagactaaccaagctgatgtgttgaaaattaacatcacaggt
ggaggacacctcagcaagaatttaacaacttctcagggacagacattgtgtgattctgcc
acattgtctaaaactgccagcagtgaaagaagtagagatgtgcctgcctccagccaacaa
tcagcagactcgattgataccaagctttgtactactaaagacatcaacagcagtgatgcc
tggtttgatgcaaaggaagaaattctatgtgacagtcagatttgtgaagacaatcaatca
gggcacatagagcgaagagactcgaatcagcaacaaaaagtggatgccagtggaatgaaa
gatcggtgtttcttgctttgtgtctcaaacttgccaaacggtgttactgagcgtgatctg
ctgctttggtttgcgaagtaccatgccagtcaagtgtccctttccaattttagtaacact
ggggttgcaatagttagcgtgagagatgccaaggatctagaggctgcagtaagagagatg
aatggccgatctattcaaggccacactctccatgtggaacacatctacacgtcgcctgca
gatcgtcaagccacctgcaaagagtcccacattcaactttcaccagctgcccataaacca
gggtttgcaggaaaagggaataataatgtttccagaccactctgctgcagtctggataag
cttaccaatatatgcagtacacccactgcatctggtacatgtgtgccacagcactatggc
accatgggcagttttgatacaatcatggcccagttatcagtgagtcacccacaaatggga
agacagcggatcgtcaacgctttgctacagttgcaggcaaagcatcatggtgtcctcagt
ggtctgcctctcaaagatatagtggaaatgacctctgaacttctcactcgctcaaccaca
aactga
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