Silurus meridionalis (southern catfish): 124379063
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Entry
124379063 CDS
T08004
Symbol
fubp3
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124379063 (fubp3)
03041 Spliceosome [BR:
smeo03041
]
124379063 (fubp3)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124379063 (fubp3)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124379063 (fubp3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
FUBP_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
KH_Vigilin
Secretin_N
CG7065_mid
Motif
Other DBs
NCBI-GeneID:
124379063
NCBI-ProteinID:
XP_046695065
LinkDB
All DBs
Position
25:complement(2717007..2741953)
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AA seq
576 aa
AA seq
DB search
MMMMMMAELAQGQASVAAAAAAASQPGMKTDGFADALHRARQIAAKMGGDPMSHLNHSSP
VVDPSIYGYGGQKRSLDEGVGNQLGAMVHPRAIITEDFKVPDKMVGYIIGRGGEQITRIQ
LESGCKIQIASDSGGMIDRPCTLTGSPENIEQAKRLLSQIVERCRNGNETSQDVLIPASK
VGLVIGKGGDTIKQLQERTGVKMVMIQDGPMPTGADKPLRISGDPYKVQQARELVAEIIR
DKDQGDFRTGRLMDFGSRLGGTSLDVAVPRYAVGIVIGRNGEMIKRIQNDAGVRIQFKPD
DGISPERIAQVIGQSDRCQHAVHLINELVNTVQERDGYGGGLAPRGRGRGRADWNMAPGG
LQEVTYTIPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPLTTDPNVRIFSIRGTPQQ
MEMARQLIDEKIGASGMASSSSFGLSPFTQGPSNPHQNGPQTFMTGGWGTTYQTWQPQGQ
QDPSHNGSQTGQMDYSKAWEQYYKKLGQQSQAQSTGPDYSKAWEEYYKKQGQAAGPGSQQ
SSTPDYSAAWMEYYRQQGAFYGQGAQHSQAPGLQDH
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgatggcggagctggcgcagggacaggcctcggtagcagcagcggca
gcagcggcgtctcagcccgggatgaagacagacggtttcgccgacgcgctgcaccgggcg
cgacagattgcagctaaaatgggtggagatccaatgtctcaccttaaccactcttctcct
gttgtcgatccctcaatttatggctacggagggcagaaacgctccctagatgaaggagtg
ggtaatcagcttggtgcaatggtacatccaagggctataataacagaagactttaaagtg
cctgataagatggtgggatacattattggtcgcggtggtgagcagatcactcgaatccag
ttggaatccgggtgcaagatccagattgcttccgacagtggaggtatgatcgaccggcct
tgcaccttgactgggagtccagagaacatcgagcaggcgaaacggctgctcagtcagatc
gtggagcgatgccggaacgggaacgaaaccagccaggacgtcctgattccggctagcaaa
gtgggtctcgtgatcgggaaaggaggagacaccattaaacaacttcaggagagaacaggg
gtgaagatggtcatgatccaggatggtcccatgcccactggagcagacaagcccttgaga
atctctggcgatccctacaaagtgcagcaagcacgagaactggtagcagaaatcatacgg
gataaggaccagggagatttcagaaccggacggttgatggatttcggatcaaggctggga
ggaaccagtctggatgtggcagtgccgaggtatgccgtggggatagtcatcggcagaaat
ggagagatgatcaagaggatccagaatgatgccggtgtgaggatccagttcaaacctgat
gatggaattagtccggagcggatcgctcaggtaataggacagtcggaccgatgtcagcat
gcagttcacctcatcaacgagctggtcaacacagtacaggagcgcgatggatacggcgga
ggtctggctcctcgcggtcgaggtagaggccgtgccgactggaacatggctcctggaggc
ctacaggaagtgacttacacgataccagcagacaagtgtggccttgtgattggaaaaggt
ggtgagaccattaagaacatcaaccagcagtctggagctcatgtggagttgcagaggaac
cctcctctcactaccgaccccaacgtgcgcatcttctctatcagaggcaccccgcagcag
atggagatggccaggcaactgattgatgagaaaattggggcctcagggatggctagcagc
agcagcttcggcctcagtcccttcacccaaggaccgagcaacccacaccagaacggaccg
cagactttcatgactggaggttgggggactacataccagacatggcagcctcagggccag
caggaccccagtcacaatggctcgcagacaggacagatggattattccaaagcgtgggag
cagtattataagaagctaggtcagcagagccaagcacagagcaccggtccggactacagc
aaagcttgggaggagtattataagaaacagggtcaggctgcaggtcctggctctcagcag
agctccactcctgactacagtgctgcctggatggagtattacagacagcagggggctttt
tatggccagggggcgcagcactcgcaggctccaggccttcaggatcattag
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