Silurus meridionalis (southern catfish): 124379065
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Entry
124379065 CDS
T08004
Name
(RefSeq) ATP-binding cassette sub-family G member 4-like isoform X1
KO
K05680
ATP-binding cassette, subfamily G (WHITE), member 4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124379065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124379065
Transporters [BR:
smeo02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG1, 4 subgroups
124379065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
SMC_N
RsgA_GTPase
AAA_16
AAA_13
AAA_29
AAA_28
AAA_18
Dynamin_N
DUF1440
nSTAND1
MMR_HSR1
MeaB
nSTAND3
NB-ARC
Rad17
AAA_23
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
124379065
NCBI-ProteinID:
XP_046695069
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All DBs
Position
25:complement(7896407..7924527)
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AA seq
717 aa
AA seq
DB search
MFTLKKGIRKARDRFFLILALCVFEFDTPALVHGGCNCFFAARRHCSARAFKRPLRLQHT
MVTKPGVTPANNQQESTSQTIAAMAEKTIQMEETGEAPPDAAMLTNLKKVENHMTMAQRF
SHLPQRSPVDLEFTDLLYTVNVGPRCRKKVCKAILKCLSGKFCNGELIGIMGPSGSGKST
LMNILAGYRYTGMEGQILVNGRPRDLRAFRKMSCYIMQDDILSPHLTTQEAMMVSANLKL
NEKMEVKKELVNEILTALGLQESAHTRTHSLSGGQRKRLAIAQELVNNPPVMFFDEPTSG
LDSASCYQVVSLMRSLALGGRTIICTIHQPSAKLFEMFDKLYILSQGQCIYKGTVPYLIP
YLTNLGLHCPTYHNPADFIIEVASGEYGDLNPVLFEAVQTGMCSEGENMNSSDKSDPTTS
CPSQCNNESGQIEKHTFATSTLTQFCILFNRTFITIYRDMVLTHLRVMSHLSIGVLIGLL
YLNIGNDASKVISNTGFLFFSMLFLMFAALMPTVLTFPLEMSVFMREHLNYWYSLKAYYL
AKTMADIPFQVICPVMYCSIVYWMTGQPPEAVRFVLFMALSTLTALVAQSLGLLIGSAST
SLQVATFVAPVTAIPVLLFSGFFITFDTMPIYLHWTTYLSYVRYGFEGVILSIYSMNRTD
LECPGIVCKFQKPEEVLQLMDVEDSKLYVDFIVLGVFFLILRVATYLVVRYKVKCER
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccttaaaaaaaggaattcgaaaggcgagagatagattttttttaattttggcc
ctctgtgtatttgagtttgacacccctgctttagttcatggcggatgcaactgtttcttt
gcagcacgacggcactgttctgcacgcgcgttcaagcgccctctaaggttacaacatacg
atggtcacaaaacctggtgtaacaccggcaaacaatcaacaggaatctacgtcacaaaca
attgctgctatggctgaaaagaccatccaaatggaagagacaggagaagcccctccggac
gcagccatgttgaccaacttgaagaaagtggaaaaccacatgacaatggcacagaggttc
tcacacctaccacagcgctcacctgtagacctggagttcaccgaccttttgtacactgtt
aatgtgggcccacgctgcaggaagaaagtttgcaaggcgattctgaagtgtttgtcaggg
aagttttgcaacggagagctcattggaattatggggccttctgggtctggcaagtccacc
ctcatgaatattcttgctggatacagatacactggtatggagggtcaaatcctggtaaac
gggagaccgcgtgaccttcgtgccttcaggaagatgtcctgttacattatgcaggatgac
attctttcgccacacctcaccacgcaggaggccatgatggtttcagccaaccttaagcta
aatgagaaaatggaagttaagaaagaattggtgaatgagatcctcactgctctaggcctg
caggagagtgcacacactcgtacacactctttatccggaggtcaacgaaaacggctggct
attgcacaggagctggtcaacaacccccctgtcatgttctttgatgaaccaactagtggt
ctagacagtgcatcctgttatcaggtggtttctctaatgaggtcacttgctctgggtgga
agaaccatcatctgtaccattcaccagcccagtgctaaactttttgagatgttcgacaag
ctgtacattctgagtcagggccagtgcatatacaagggcacagtcccatatctcatcccc
tatctgacgaacctgggtcttcattgccctacttaccacaatcctgcagacttcataatt
gaagtggcatcaggagagtatggtgatttaaatcctgtgctcttcgaggcagtgcagact
ggcatgtgttcagagggtgaaaacatgaactctagtgacaagagtgatcccacaacctcc
tgtccatcacagtgtaacaacgagtcaggacaaattgaaaaacatacctttgccaccagt
acactcacacagttctgcattctttttaaccgaacctttataactatatacagagacatg
gtgttgacccacctgagggtgatgtcacatctgtctatcggagttctgatcggtctgctg
tacctgaacattggcaatgatgccagcaaagtgatcagcaacactggattcctctttttc
tccatgctcttcctcatgtttgctgcattaatgcccactgtccttacatttcctctggag
atgtcagtctttatgagggagcatctgaactactggtacagtttaaaggcttactaccta
gcaaagaccatggctgacattccattccaggtcatatgtcccgtaatgtactgtagtata
gtgtactggatgacaggtcagcctccagaagcggtcagatttgttctcttcatggctctg
tccaccttgactgccctggtggctcagtctctggggctcctcattggatctgcttccact
tccctgcaggtagctacatttgtagcaccggtgacagccattccagtcttgcttttctct
ggattctttattacctttgacaccatgccaatatacctacattggaccacctatctttct
tatgtcaggtatggcttcgagggtgtgatcctctccatttatagcatgaaccgaacagac
ttggagtgcccaggcattgtctgcaagttccagaagccagaagaggtgttgcagctcatg
gatgtagaagactccaagctctatgtggacttcatagtcttaggggttttcttcctcatt
cttcgggtcgccacttacctagtggtgcgatacaaagtcaagtgtgaacgttag
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