Silurus meridionalis (southern catfish): 124379093
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Entry
124379093 CDS
T08004
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04060
Cytokine-cytokine receptor interaction
smeo04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124379093 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
124379093 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124379093 (tnfsf13b)
04090 CD molecules [BR:
smeo04090
]
124379093 (tnfsf13b)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Tumor necrosis fators
124379093 (tnfsf13b)
CD molecules [BR:
smeo04090
]
Proteins
124379093 (tnfsf13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
124379093
NCBI-ProteinID:
XP_046695148
LinkDB
All DBs
Position
3:13270077..13275840
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AA seq
275 aa
AA seq
DB search
MRAVGAAPVQVEGRRLSWAIVVVTVLAITSSSLSALSLYHMLALKAEVEVLRTEVSRRRE
GCRDTPGESVRGPQPQQQQHEDDKNNALSKQVSNSVTPPEMQTDTFGRQREQFRLKRRSL
ERESEQSVFQPFLQMMADSKREIFQKDFSLQKHASIPWQPSLKRGSALEEDQDAIVVKEE
GYYFIYSQVYYKDPTFAMGHIVIRMKKHVVGDESQHVVLFRCIQSMDTKYPFNTCYTGGI
VKLDVGDKVELLIPRPTPNISLDGDCTYMGAIRLA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcagtgggtgctgctccggttcaggtggagggtcggaggctttcatgggctatt
gtggttgtgactgtgttggcgatcacctcatcgtcactgtcagctctgtccctgtaccac
atgctggcactgaaggcagaggtggaggtgctgagaactgaggtgagccgcaggagggaa
ggatgcagagacacaccgggggaaagtgtaagaggacctcagcctcagcaacagcagcat
gaagatgacaaaaacaatgcactgagtaagcaggtgagtaacagcgtgacccctcctgaa
atgcagacggacacttttggaaggcagcgagagcagttccgattgaagaggagaagtctg
gagagagagtctgaacaatcagtgtttcaaccgttcttgcagatgatggctgacagtaag
agggagatctttcaaaaagacttttcacttcagaaacatgctagcattccgtggcagccg
agtctaaagcgaggctcagctctagaggaggatcaggatgccattgtggtcaaggaggag
ggttactactttatttacagtcaggtttattacaaagaccctacttttgcaatgggccac
attgtgatccgcatgaaaaagcacgtggtcggggacgagagtcaacatgttgttctgttc
cgctgcatccagagcatggacacgaaatacccttttaacacctgctataccggagggata
gtaaagttggatgttggggacaaagtggagctgctcatacctcgtcccacaccaaacatc
tcactggatggagactgcacctacatgggagccatcaggctggcctga
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