Silurus meridionalis (southern catfish): 124379111
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Entry
124379111 CDS
T08004
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124379111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124379111
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124379111
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
124379111
NCBI-ProteinID:
XP_046695176
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Position
25:5932340..5944971
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AA seq
796 aa
AA seq
DB search
MALKKKDKLKPMKPFTLEIDDRTDEERKKDKEIRKHVTGKSKTPMDTHLHEDRGHVRPQI
RFDLSYADKVFGINRETELSERFNRERLYDDVSSGDVSRLEGLEEYLQKRKMGLTSTTYI
FSGKTVLMKALLNLQNGHNDTVEYLLDIAERMNDLQDLVNAKCTDPYYKGQTALHIAIER
RNKHYVKLLIQKGANVHAMACGKFFQPRKKSFYFGELPLSLAACTNQEDIVDLLMDKADV
RQKDTLGNIVLHALVMLVDNKSPENNDFVISMYDFILTKDAAKNPYKEKLEDIENNQGLT
SIKLAAKLGKIRLLEHILHREFQQEECRHLSRKFTEWVYGPVHGSLYDLDSIDTYKPNSV
LEIVVYTPDIENRLEMLQLEPLNKLLEDKWKLFARWIFLFKFIVYLIYLSIFTVVSYYRE
EGKPPFPIKTDFAGLMLFVGQVIMVIGSVYFIVSVLIEMYKKRPSLQTMLVDGYSDMLFL
LQAGLFIICAGMYLNGNQEYLAFLVISVAMGWINLLYFSRGTRYMGIYNIMIQRVFLGDI
LRFLFVYIVFLIGFSAALVTLLREPGKGSPLEKNLENETDKCNKNSFKTIAFTTLELFKF
TIGMGDLEFTENYEYKHVYFVLLLTYIVLTYILLLNMLIALMSKTVDVMDQKSTSIWKLQ
RAITTLDLETFMQYVNCLKTRVACCLKMNSSDFLQMERLSAVKRNLGKKEDDWHWYLRVE
EFKWKNWNRSLGIIMDEPGEGSSKKQVEPNRGPSQDALVNEDESKEPSQSDVSQKKHKRY
ELQAEQEAEPLASSSM
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaaaaagaaggacaagttgaaacctatgaaaccctttactttggagattgat
gacaggacagatgaggagaggaaaaaggacaaagaaattagaaaacatgtaactggaaag
tccaaaacaccaatggacactcatcttcatgaggaccgtggtcatgtccgtccccaaatc
cgatttgacctgagttatgctgacaaagtttttgggataaatcgtgaaacagaactttct
gagaggtttaatcgtgagaggctttatgatgacgtgtccagtggtgatgtcagtaggctt
gagggcctggaggagtatctgcagaaaagaaagatgggcctgacaagtacaacttatatt
ttcagtgggaagacagtcctgatgaaggccctgctaaacctgcagaatggacacaacgat
acagtggagtacttgctggacattgcagagagaatgaatgatcttcaggatttagtgaat
gcaaaatgcacagatccatactataaaggacagacagctcttcatatagccattgagagg
agaaacaagcattatgtcaagctgctcattcagaaaggggctaatgtccatgcaatggcc
tgtgggaaattctttcagccacggaaaaaaagtttctactttggggagcttccgctttca
ctggcagcatgtactaatcaggaagacatagtagacctgctgatggataaagcagatgtg
aggcaaaaggacactctgggcaacatagttctccatgctcttgtgatgctggtggacaat
aaaagccctgaaaataatgactttgtcatttccatgtatgacttcattcttaccaaggat
gctgctaagaatccctacaaggagaagctggaggacattgagaacaatcagggacttact
tccatcaagctggctgcaaagctgggaaagatcaggctgcttgaacacattctgcatcgt
gagttccagcaggaagagtgcaggcatctgtctcgaaagttcacagagtgggtatatggc
ccagtgcacgggtcgctgtatgacctggactctatcgacacctacaagccaaactctgtc
cttgagatagttgtttataccccagatatagagaatcgccttgagatgctccagcttgag
ccacttaacaaactactggaagacaaatggaaattatttgccagatggatattcctcttc
aagtttattgtttatctcatatatctcagcatcttcacagttgtttcttattaccgtgaa
gaaggaaaacccccatttcccatcaagacagattttgctggtttgatgctgtttgtcggt
caagtcatcatggttattggctcagtctacttcatcgtgagcgtgctgatagaaatgtat
aaaaagcggccaagtctgcaaacaatgctggtagatggctattcagacatgctttttttg
ttacaggctgggttgtttatcatctgtgctggaatgtatttaaatggaaaccaggagtat
cttgcctttctggtgatcagtgtggctatgggctggattaatctgctttacttctccaga
ggaactcggtacatgggcatctacaacatcatgattcagagggtcttccttggtgacatc
ttgcgtttcctgtttgtttacatagtcttccttatcggattttcagcagcactagtgact
ctactccgtgaacctggaaaaggaagtcctttggaaaaaaatcttgaaaatgagacagat
aagtgcaacaaaaactcctttaaaaccattgccttcaccactctagaactgtttaagttt
actataggcatgggtgacctggagttcacagagaactatgagtataagcatgtgtatttt
gtactgcttttaacctacattgtgctcacgtacatcctgctgctaaacatgctaattgct
ctgatgagcaaaactgtggacgtcatggatcaaaagagcaccagcatctggaaactccag
cgtgccattaccaccttggacctcgagacatttatgcagtatgtaaattgtctgaaaacg
agggttgcatgctgtctgaagatgaattcttcagactttctgcaaatggagaggctctca
gcagtgaagaggaacctgggcaaaaaagaggacgactggcactggtatctcagagtggaa
gaattcaaatggaaaaattggaaccgcagtctgggtatcatcatggatgaacctggagag
ggtagttcaaaaaagcaagttgaacctaacagagggccatcacaagatgctcttgttaat
gaggatgagagtaaagaacccagccagtctgatgtcagccaaaagaaacacaaacggtat
gaactgcaggcggagcaagaggcagaacccctggcttccagctcaatgtaa
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