Silurus meridionalis (southern catfish): 124379130
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Entry
124379130 CDS
T08004
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon isoform X1
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124379130 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124379130 (chrne)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
124379130 (chrne)
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
124379130
NCBI-ProteinID:
XP_046695204
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Position
25:14937427..14943950
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AA seq
517 aa
AA seq
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MAARTVWTCLVAVVLVHTVVLVSGNEESQLIAHIFKNYNKNIRPARHPEDKVDVQVKITL
TNLISLNEKEETLTTSVWIEIQWSDYRLTWNPSDYYGIGVIRVPSNNVWLPDIVLENNID
GKFGVAYYANVLIYADSSIYWLPPAIYRSTCAIEITYFPFDWQNCTLVFRSQTYSANEIN
LILAVDLETNKSIEWVDIDPEAFTENGEWAIKHRPARKLINPRYTPDDLEYQEIYFNLII
QRKPLFYIINIILPCSLISSLVVLAYFMPAKAGGQKITVSISVLLAQTVFLFLIAQKVPE
TSLSVPLIGKYLIFVMSVTTVIVTNCIIVLNYSCRTPSTHTMNRKIKQIFLEVIPRFLGM
TPLVDEGEDAGGMDGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLTRSIVDA
IDVSTTASLYKSLAHAAPEIKECVDACNFIAENTREQNDIGSEMESWVLIGKMIDKVCFW
VAMLLFSIGTVAIFLMGHFNQVPEYPFSWENKKYAPE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccggactgtctggacttgtttggttgccgttgtgcttgtgcatacagtagtt
ctagtcagtggaaacgaagagtctcagctcatagcacatatttttaagaactacaacaaa
aacatccggccagcgaggcaccctgaagacaaggtggacgtccaggtcaagatcactctc
accaacctcatctctctgaacgagaaagaggagactctgaccaccagcgtatggattgag
attcaatggtctgactatcgcctgacatggaacccctcagactactatgggattggtgtt
attcgtgtaccctcaaacaatgtgtggttgccggatatagtactggagaacaacattgac
ggaaaatttggtgtagcatactatgctaatgtgctaatctacgccgatagctctatttac
tggttgcccccagccatttaccgcagcacctgcgctatagagatcacctacttccctttc
gactggcaaaactgcacgctggtcttcaggtctcagacatacagcgctaacgagatcaac
ttgatcttggccgtcgatttggagaccaacaagtccatcgagtgggtggatatcgaccct
gaagccttcactgaaaacggtgagtgggccatcaagcatcggccagcgcgcaaactcatc
aacccacgctacacaccagacgacctggagtaccaggagatctatttcaacctcattatc
cagaggaaacccctgttctacatcatcaacatcattctgccctgctcgctcatctcctcg
ctcgtcgtactcgcctacttcatgcctgctaaagcgggaggacaaaagataaccgtgtcc
atctccgtcctcctcgcccaaactgtcttcctctttctgatcgctcagaaggttccggaa
acgtccctctctgtacctcttataggaaagtacctgatcttcgtcatgtctgtcaccacg
gtgatcgtcacaaactgcatcattgttctcaactactcctgccggaccccgagcacacac
accatgaatcgcaaaatcaaacaaattttcttggaggtgatccctcggttcctgggaatg
accccactggtggacgagggagaggacgccggagggatggacggagtgagggagaggaga
cgcagctcgtttggcttgatgcagcgggcagaggagtacgtgctgaaacagccgaggagc
gagatgatgttcgacaagcaaagagagagacacggactcacacggtcaatcgtggacgct
atagatgtgagcaccactgcaagcctctataagagtttggcccatgctgcaccagagatt
aaagagtgtgtggacgcctgtaacttcatcgcagagaacacaagggagcagaatgacatt
ggttcagagatggagagctgggtgctgattggcaagatgatcgacaaagtctgcttctgg
gtggccatgttgctcttttccatcggaacggtggccattttcctcatgggccatttcaac
caggtccccgagtaccctttctcctgggagaataaaaaatacgctcctgagtaa
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