Silurus meridionalis (southern catfish): 124379146
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Entry
124379146 CDS
T08004
Symbol
supt4h1
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124379146 (supt4h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124379146 (supt4h1)
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124379146 (supt4h1)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124379146 (supt4h1)
RNA polymerase I system
124379146 (supt4h1)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
124379146 (supt4h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
124379146
NCBI-ProteinID:
XP_046695234
LinkDB
All DBs
Position
25:complement(6462761..6466710)
Genome browser
AA seq
117 aa
AA seq
DB search
MSLETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCESYLQMKGNREMVYECTSSSFDGV
IAMMSPEDSWVSKWQRIGNFKAGVYAVTVTGRLPPGVVRELKSRGVIYRSRDTAVKT
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggagaccgtaccaaaagatctccgtcatctacgggcttgtttgctgtgttct
cttgtcaagaccattgaccagttcgagtatgatggctgtgataactgtgagtcctacctg
caaatgaaggggaaccgggagatggtttatgaatgcacaagctcctcctttgacggcgtc
attgcaatgatgagtcctgaagacagctgggtttctaagtggcaaagaataggaaatttc
aaagcaggcgtctatgctgtaaccgtaactggaagattacccccaggagtggtgcgagaa
ctaaagagcagaggagtcatctacaggtccagagacacggcggtgaagacgtaa
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