Silurus meridionalis (southern catfish): 124379163
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Entry
124379163 CDS
T08004
Symbol
tmc2a
Name
(RefSeq) transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124379163 (tmc2a)
03037 Cilium and associated proteins [BR:
smeo03037
]
124379163 (tmc2a)
Transporters [BR:
smeo02000
]
Other transporters
Pores ion channels [TC:
1
]
124379163 (tmc2a)
Cilium and associated proteins [BR:
smeo03037
]
Other cilia and associated proteins
Stereociliary proteins
124379163 (tmc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DegS
Na_K-ATPase
Motif
Other DBs
NCBI-GeneID:
124379163
NCBI-ProteinID:
XP_046695260
LinkDB
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Position
25:complement(4087216..4098847)
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AA seq
757 aa
AA seq
DB search
MSEGERARLMEEVEEKKKLISNIRSKPWRMKRRLKHLKEAQVFVDKFEGALGKGKGKKLY
AFKVMMAKKWIKFQRDFDNFKTACIPWERKIKEVESHFGSSVASYFIFLRWMYGMNLVLF
SLTFGLIVIPEVLMGLPYGSIPRKTVPREEQDTAMDYSVLTDFSGYCKYSVLFYGYYNNQ
RTIGFLKFRLPLSYLMVGVGTFGYSLMVVIRTMAKNADVGGGDSEDSEFTFAWKMFTSWD
YLIGNSETADNKFASITTSFKESIVDEQENQKDENIHLRRFLRVLANFLIFCILGGSGYL
IYFVVKRSQEFAGRDDLSWYEKNEMEIIMSLLGLVGPMLFETIAELEEYHPRIALKWQLG
RIFALFLGNLYTFLLALFDEVNQKLVEEQSIKNASIWLMKEYYANYSASNPNATGTPPPL
NPADVIRGPCWETTVGIEFVKLTVSDIQVTYLTILIGDFVRALVVRFLNYCWCWDLEAGW
PSYGEFDISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLTSMYYQCWAVMATNVPHER
VFKASKSNNFYMGLLLLILFLSLLPVVYTIMSLPPSFDCGPFSGKERMFDVLIETIDLDL
PAFMGKLFGYAANPGLIIPAVLLMVLAIYYLNSVSEAYQNANNELKKKMQMARDEEKNRR
NNKDSTNQVMKDLEDLLPRRPNMPDSEEHADKRGGGKPSKVKPGSAANGVNLQKDVSLAS
ANPNARGPVNRAPGPRTAGPLPGHPGPPPGTGHRRGQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagggcgaaagggctagactaatggaagaggtggaggaaaagaagaagctgatc
tctaatattaggagcaagccgtggcggatgaagaggaggctcaaacacctcaaggaagct
caggtgtttgtggataagtttgaaggtgctctgggcaaaggaaaaggcaagaaactgtat
gctttcaaagtgatgatggcaaagaaatggatcaagtttcagagagacttcgataatttc
aagacggcctgcatcccctgggaacggaaaataaaggaagttgaaagtcacttcggctct
tcagtcgcctcgtacttcatctttctccgctggatgtacggcatgaaccttgttctcttc
agtttgacctttggcctgatcgtgatcccagaggttctcatgggtctcccttatggctct
attcctcgaaaaacagttccacgagaggaacaagacaccgcaatggactattcggttctc
acagactttagtggttactgcaagtactcggtgttattctatggctactataataaccag
agaaccattggcttcctgaagttccgcctccctctgtcctacctcatggtgggcgttggg
accttcgggtatagcctcatggttgtgatccgaacgatggctaaaaacgcagatgtgggg
ggtggggacagcgaggacagcgagttcacctttgcctggaagatgttcacaagctgggac
tacctcattggtaactcagagacggctgacaacaagttcgcctccatcaccacaagtttt
aaggagtccattgtggatgaacaggagaaccagaaggatgagaacatccacctcaggaga
ttcctgcgtgtcctggccaacttcctcattttctgcattctgggaggaagcggatatctc
atttacttcgtagtcaaacgctcacaagagtttgctggcagggacgatctgagctggtat
gagaaaaatgagatggagatcataatgtcgctgcttggacttgtgggcccaatgctgttt
gagactattgccgagctggaggaataccacccccgcatcgccctcaagtggcaactggga
cgcatcttcgcccttttcctgggtaacctctatacattcctgctggctctgttcgatgag
gtcaatcaaaagctggtggaggaacaatccatcaagaatgcaagcatttggttaatgaag
gaatattatgccaactacagtgccagtaacccgaacgcgacaggcacgccgccccctctc
aacccggccgatgtgatccggggcccgtgctgggagacaacagtggggatagaatttgtg
aaactgaccgtctctgatatccaagtgacgtatctgacgatcctcatcggggactttgtg
agggctctggttgttcgcttccttaactactgctggtgctgggacttggaggcaggctgg
ccctcctatggtgagtttgacatcagtggcaatgtccttggactggtcttcaatcaaggg
atgatttggatgggagcattctacgctcctggtctggtcggcatcaacgtccttcgtctc
ctgacctctatgtactaccagtgctgggccgtcatggccaccaacgtcccccatgagcga
gtcttcaaggcctcaaaatccaacaacttctacatgggtctccttcttctcatcctcttc
ctcagcctgctgcctgtcgtctacaccatcatgtctctgccaccgtccttcgactgtggg
ccctttagtggcaaagagaggatgtttgatgtactgatcgagacaatagatctggatctg
cctgcctttatggggaagctgttcggttatgctgccaaccccggcctcatcatcccagct
gttttgctcatggttctggcaatttactatctcaactcagtgtctgaggcctatcagaac
gccaacaatgagctaaaaaagaaaatgcaaatggcaagagatgaggaaaagaacaggagg
aataacaaagacagcacaaatcaagtgatgaaagatttagaggatttactacccagacgc
ccgaatatgccggattcagaggaacacgcagacaaacgcggtggaggaaaaccatcaaaa
gtgaagcccggatcggctgcgaatggtgtgaacctacagaaagacgtatcactggcttcg
gctaatcctaatgcccgggggcctgtgaaccgagccccaggccccaggactgctgggcct
ctgccaggacacccgggtccacctccaggcacaggacatcgcaggggacaataa
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