Silurus meridionalis (southern catfish): 124379170
Help
Entry
124379170 CDS
T08004
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
124379170 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124379170 (hdac4)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
124379170 (hdac4)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
124379170 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
124379170
NCBI-ProteinID:
XP_046695276
LinkDB
All DBs
Position
3:complement(23083923..23249746)
Genome browser
AA seq
1046 aa
AA seq
DB search
MSSQSHSDSFPSKEQPLELLKPSGLNHIPSVDVSAVLPVPVPPAAIPMDLRVDQQHLPVS
GEQQLQQELLALKQKQQIQRQLLIAEFQRQHEQLSRQHEVQLQEHIKHQQELLAMKHQQE
LLEHQRKLEQHRREQELEKQQREQKLQLLKNKERGQESAVASTEVKMRLQEFVLNKKKAL
AQRSLNHCMPNDPRYSYWKTQHSSLDQSSPPQTGMSTYNHPVLGLYDSKNDFPLRKTASE
PNLKLRSRLKQKVTERRSSPLLRRRDGPVTSAKKRSLDVTESACNSAPGSGPSSPNNSSN
NITNENGITSSICNSPVEPSLAHRLASREGPVSQLSLYTSPSLPNITLGLPATGSTTVAS
GQQEGERLAIAGLQPGLSITTPFITGAHLPSYLAATALEREGGSAHNPLLQHMALLEQSQ
NPLVSGLSGLPLQSPSIHKLRPHRPLGRTQSAPLPQNTQALQQLVVQQQHQQFLVKQKQH
FQQQQLHISKIMATKPNEPGRQHESHPEETEEELREHQAQSDPAEGLMRGITIKQEPPDQ
LEEELQQRERQAEHELIFRQQALLLEQQRIHQLRNYQASMEAAGLSVTLPGHRPLSRAQS
SPASASFPIVVQEPPTKPRFTTGLVYDTLMQKHQCMCGNTNTHPEHAGRIQSIWSRLQET
GLRSKCECIRGRKATLEELQTVHSEPHVLLYGTNPLRQKLDSSVTPMFVRLPCGGIGVDS
DTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMGFCYFNSV
AIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGSGAPD
EVGSGPGMGFNVNMAFTGGLEPPMGDVEYLAAFRTIVMPIANEFAPDVVLVSSGFDAVEG
HPPPLGGYKLTAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELE
PLPEKIIQQRPNLNAVRSMEKVVEAHSKYWHCLQRSVSTMGYSLIEAQKCETDEAETVTA
MASLSVATKNIGKRSEEEPMEEEPTL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccaaagtcactcagatagcttccccagtaaagagcagcctctggagcttctc
aagccgtccggactcaaccacattccctcagttgatgtgagtgcggtgttgcccgttccc
gttccccctgctgccatcccgatggatctgcgtgtggatcagcagcacctgcccgtgtcc
ggggagcagcagctgcagcaggagctcctggcgctcaaacagaagcagcagatccagagg
cagctgctcatcgccgagttccagcggcagcacgagcagctctcacgccagcacgaagtc
cagctacaggagcacatcaagcatcagcaggagctgctggcgatgaagcatcagcaggag
ctgctggagcaccagaggaagctggagcagcatcgtcgcgagcaggagctggagaaacag
cagcgcgagcagaaactgcagctgctcaaaaacaaggagcgtggccaggagagtgcggtg
gcgagcacagaggtaaagatgcgtcttcaggagttcgtgctgaataagaagaaagccctg
gcccagaggagcctcaaccactgcatgcctaatgacccacgctactcatactggaaaacc
cagcacagttcactggatcaaagttctcctccgcagacagggatgtccacttacaaccac
ccagtgctgggactgtacgattccaaaaacgactttccactccgcaagacagcgtctgag
ccgaatctgaagctgcgctccaggctgaagcagaaggtgacggagcggcgaagcagcccg
ttgctgcggaggagggacggccccgtaacttcggccaagaagcgctctctggacgtgaca
gaatcagcttgtaacagtgcaccaggctctggccccagctcacccaacaacagctccaac
aacatcactaatgagaacggcatcacaagctcaatctgcaacagtccagtggagccttcc
ctggcacatcgtcttgccagcagagagggtcctgttagccagctgtctctgtacacatcc
ccctccctcccaaacatcactctgggcttgccagccaccggctccaccactgtggcatcc
ggccagcaggagggtgagcgactggcgatagcaggcctgcagcccggattatccataacc
actccgttcatcactggagcccatcttccttcctatctggctgccacggccttggagcga
gagggaggctccgcccacaacccgctgctgcaacacatggccctcctggagcagtcgcag
aaccctctggtttcaggtctaagtggtctgcccctacagtcaccttccatccataagctg
cgtcctcaccggccactgggtcgaacccagtcagcgcctctgccccagaacacacaggcc
ctgcagcagctcgtggtccagcagcagcaccagcagttcctggtcaaacagaagcagcac
tttcaacagcagcagctccacatcagcaagatcatggccactaaaccgaatgagccaggc
aggcagcacgagagtcacccggaggagacggaggaggagctgagggagcatcaggctcag
agcgaccctgccgaaggcctgatgcgtggaatcaccatcaaacaggagcctcctgatcaa
ctggaggaggagctgcagcagcgagagagacaggcagagcacgagctgatcttcagacag
caggctttgcttttggaacagcagaggatccatcagctaagaaactaccaggcatcgatg
gaggccgccggtttgtctgtcactttaccaggccaccgcccactgtccagagctcagtcc
tctccagcttctgcttcattccccattgtggtgcaggagcccccgactaagccgcgtttc
accactgggctggtgtatgacactctcatgcagaagcaccagtgtatgtgtggcaacaca
aacacccacccagagcatgcgggccgaatccagagtatctggtccagactgcaggagacc
ggactgcgcagcaagtgtgagtgtatccggggcaggaaggccacacttgaggagctgcaa
acagtccattctgaacctcatgtactgctctacgggaccaacccactaagacagaaatta
gacagctctgtgacacccatgtttgtgaggttgccctgcgggggcatcggggtggacagc
gacactatctggaacgaggtacactcttccagcgcggctcgtctggccgtcggctctgtg
gtggagctggtttttaaagtggcgtctggagaactgaagaacggttttgctgtggtgcgg
cctccaggacaccatgccgaagagagcacccccatgggattctgttattttaactcggtg
gccatcgcagccaaactcctccagcagcgactgaatgtcagcaagattttgatagtggac
tgggacgttcaccatggcaatggcacccagcaggctttctacagtgacccgaatgtgctg
tatctgtccctgcatcgctatgacgacgggaacttctttcctggcagcggcgctcctgat
gaggtgggctcagggcctggtatgggcttcaacgtgaacatggccttcacaggcggtttg
gagcctcccatgggtgatgtggaatatctggctgccttcaggacaatagtgatgcctatt
gctaatgagtttgcacccgacgtggtcctggtttcgtcagggttcgatgccgtggagggc
cacccgcctcctctggggggatacaaactcacagccaagtgtttcggctacctgaccaag
cagctgatgggcctggccgggggccgcctggtgctcgccctcgaggggggtcacgacctc
actgccatctgcgatgcgtctgaagcatgtgtttctgctttgctaggaaacgagttggaa
ccactacccgagaagattattcagcaaaggcccaatctcaatgctgtgcgctccatggaa
aaagttgtggaagcccatagtaaatactggcactgcctgcagcgcagtgtttcgacgatg
ggttactccctgattgaggctcagaagtgcgagacagatgaggctgagactgtaaccgcc
atggcctcattgtctgtagctaccaagaacatcgggaaaaggtctgaagaagagccaatg
gaggaagaaccaacactgtag
DBGET
integrated database retrieval system
