Silurus meridionalis (southern catfish): 124379182
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Entry
124379182 CDS
T08004
Symbol
dtx2
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124379182 (dtx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124379182 (dtx2)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124379182 (dtx2)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124379182 (dtx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-UDP
zf-rbx1
WWE_5
Motif
Other DBs
NCBI-GeneID:
124379182
NCBI-ProteinID:
XP_046695291
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All DBs
Position
25:complement(13701693..13711257)
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AA seq
589 aa
AA seq
DB search
MATASGFPSRSGAALSAASPGTSSGAVGQSQAMVAVWEWQDDSGAWRPYSGQVSCFIEQC
LHPHRSAGPAVTTISLGQSDASLAAYIIDIPSFTQFRQDTGKVRSVRRSLFPQSPALGNG
VLWEWANDEGSWTAYEMHTSALLEHSYVTRQTTADLGPHSQNYVVDFMTFEQVNKTSGYR
RRVRRQTGTPYPPASVSGTGTGSGSVIHSGPACTCQQCLSHGPMPGRSRHSFSAAAGPSS
AYSPYPRRPLSVGNMAWGGPWSSAASSMAQPPGPVQSFPSTPNGLSIPSIPLQLNGSSSV
SAALAGMASILMSAAGLGVRFMTSPSGRPNQAQASSVKRAKRQHRTAAQKPEEVIKKYME
EVRAIPDEDCMICMERLSCPSGYDSPEGGSQALQPSTVGKFTKCGHTLHMLCMLAMYNNG
NKDGSLQCPSCKTIYGEKTGTQPKGKMEIYSIPQSLPGHPDCGTIQIIYNIPPGLQGSEH
PNPGQPYTCRGFPRFCFLPDNDKGRKVLELLKVAWTRRLIFTVGTSNTTGEPDTVVWNEI
HHKTEMMSNVSGHGYPDPNYLDNVLAELAAQGVTEDCLKRDTSRSREPE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcttccggtttcccttcgcggagtggcgcggctctgtccgctgcctcgccc
gggacctcgtccggagccgtcggccagtcgcaggccatggtggcggtgtgggaatggcag
gacgattcgggcgcgtggcggccctacagcggccaagtcagctgcttcatagagcagtgt
ctccatcctcaccggagcgcaggcccggctgtcaccaccatctccctagggcagagtgac
gcgagtctggctgcctacatcatcgacatcccgagcttcacacagttccgacaggacacc
ggtaaagtccgctcggtgcgacgcagcctgttccctcagtcgcctgcgctgggcaacggc
gtgctctgggaatgggccaatgacgaaggcagctggacagcttacgaaatgcacacgtct
gctttgctggagcacagttacgtaacccgccagaccacggctgacttaggaccacacagc
cagaactacgtggtggacttcatgacgttcgagcaagtcaacaagacgtctggttacagg
cggcgcgtgcgcaggcaaaccgggactccgtacccgcctgcatcggtctcgggcacgggc
acgggctcggggtcggtcatccactcgggaccggcatgcacctgccagcagtgtttgagc
cacggacccatgcccgggcgctcacggcactctttctcagctgctgccggcccttcctcg
gcgtactcgccgtatcccagaaggccgctctccgtagggaacatggcttggggaggaccc
tggagctcagcggcttcttctatggctcagcctccagggccggtgcagtcctttccgagt
actccgaatggcttgagcatcccgtcaatccccttacaactgaacggctccagcagcgtg
agtgccgccctggcaggcatggcttccattttgatgtctgcagcaggactgggagttcgc
ttcatgaccagcccctccggcaggcccaaccaagcccaagccagctccgttaagagggca
aagagacagcacaggacagctgcccagaaacccgaagaggtcattaagaagtacatggag
gaagtgcgggcgatcccagatgaggattgcatgatttgcatggagcgtctgtcgtgcccc
tctggctacgacagccctgaagggggaagccaggcgctgcagcctagcaccgtgggcaag
ttcaccaagtgtggtcacaccttacacatgctctgcatgctggccatgtacaacaacggc
aacaaggacggcagcctgcagtgtccctcttgcaagacaatctacggcgaaaagaccggc
actcaaccaaagggcaagatggaaatatacagcatccctcaatccctccctggtcacccg
gactgtggcacaatacagataatctacaacatccctcctggattacagggttccgagcac
ccgaatccgggccagccttacacctgtcgaggttttcctcgcttctgcttcctgcctgac
aacgacaagggcagaaaggttctggagctgctgaaggtggcgtggacgcggcgtttgatc
ttcacagtaggcacgtccaacaccacaggcgagcccgacacggtggtgtggaacgagatc
caccacaagaccgagatgatgtcgaacgtatcgggccacggatacccagaccccaactac
ctggacaacgtcctggccgagctggcggcgcagggcgtaaccgaggactgcctgaaaaga
gacacgtctcggtcacgtgagcccgagtag
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