Silurus meridionalis (southern catfish): 124379218
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Entry
124379218 CDS
T08004
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04517
IgSF CAM signaling
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124379218 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124379218 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124379218 (sptbn4a)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124379218 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
124379218 (sptbn4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
124379218
NCBI-ProteinID:
XP_046695357
LinkDB
All DBs
Position
25:16001243..16024158
Genome browser
AA seq
1446 aa
AA seq
DB search
MLMPREGGRDEAQKLHRKWMKHQAFMAELARNKEWLAKIEQEGKELIEEQPELGPVVQQK
LKEMRECWTHLESTTKAKARQLFETQNHRTTDVPTHSLSDLDQHLSLLQDEPPHSSHSSQ
HSSHSSHSSQATYSAHTSPSASAAILSPRTMLSQQLQRIQLMEAQMQLYPGLIQPKSDIS
LQSDGDETNLLQRGPVGLEVQGSGGVAETRIVRLIEPLKERRRILLASKEMHQVTQDLED
EILWIQERLPLASSTEYGTNMQSVQQLVKNHEALQMEMQARKGRVEEVLERAEAVAALRT
PEVEIVREGAMHVRQLWEVLQVEAERRTVMLDAVSHAQQYYTEAAKAESWLSGQKLHVLN
KENGSDEASTLRLLKEQLALEQKVETYAETVGFLSQQCRRMLELGHPDSEQITKQQAHID
RLYVSLKDLVEQKKTKLEQQYWLYQLKKEVEALEKWISEREAVASSTELGQDLEHVTVLQ
EKFTEFRAETSAVGQRQMDSVNKMVNEMIDCGHADAATIAEWKDGLNESWADLQELMETR
AQMLAASHQLHKFFTNCQEVLLQIEGKMRQLPEVRSCQVSTAKPGTLQRLLHSFEHSLQL
LVSQVRQLQENASQLRAIYAGEKADTILVREQEVMHAWKELLLACEGSRVQVTTVTDKIQ
FFAMVRELSMWTDGIIGQIGPVEDARDVSSLECMISQHQSLKSKMESKSKSFMHCVEMGK
MLLAAHNPAAEEVKEKLEYVMAKQKDLNDKWEQHWEKLQRMQQRIQSAQKSKAEGTWHAT
KESLSSGGEAEGGADEVEQLIRRHEAFRMAASSWKEHFSSLRQAEKLKEEQSKQSTTSSL
LNRQMFPLSCLVPSSSSSSSSSSLFRSPLQDMLLEPKSVPDLTHTPHAFAQRLGSALNPY
VPVMNGSPYHRLSQQVGDLGTNSSSQTGLNQQGVPGVDSSSYTGLNQVGMLGSDSSSYTG
LNQQGVTGANGLNPLSGLGVAEPKTTYAWQQFKADLQPRINHMHQAVGPLLEAHAGHLVP
AGVPMGTEASLELLHGRLQRDPRGSRSDPQMDHLRREREYRLGRHTSSEQEIQARLNELP
MIVRQERHQRRRLERQSSSEQEGSSRHRLQKHESSDQESGKEGSDKKQTGEKRSTMAEIV
EQVQEREACQARGEVYRPSSSLSAPVSRLDRPRARDRPKPRRRPRPKEPEETRRSRSAPA
QSAPSTPQPPTHTVHQEGFLYRKHEEEGKEKSPNSKSWVNLYCVLNKGEIGFYKDARNTT
TPYNDEPLLNLAICTFDTTNGYKKKKNVFILRSETDGDYIFLAKDEEDLKRWVNSINASL
NEIEEIAKWEKPTTSSTDPDKSERKERSEGAEPSEKSERSDRSDKREGEKSSESSEKRDT
LERVRMERRGRERGERERGERGERGEREERGERGERGTREKEREREREREKGDRSSRGSS
TSGKSK
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgcctcgtgagggcgggcgggatgaggctcagaagctgcacagaaaatggatg
aaacaccaggccttcatggctgaactggctcgcaacaaagaatggctggccaaaatcgag
caggagggcaaggagctgattgaggagcagccagagcttgggcctgtggtgcagcagaag
ctgaaggagatgagggaatgctggacacatctggagagcaccaccaaggccaaagctcgc
cagttgtttgagacacaaaaccaccgaaccacagatgttccaacgcacagcctctcagat
ctggaccagcacctcagcctgctccaggatgaaccaccacattcgtcgcactcgtcacaa
cactcctcacactcctcacactcctcgcaagcaacatactcggcacacaccagcccctcg
gccagcgccgccatcctgagccctcgaaccatgctcagccagcagctgcaaaggatacag
ttaatggaggctcagatgcagctctaccctggtttgattcagccaaagtccgacattagc
ttacagagtgatggagatgaaaccaatctgctgcaacgtgggccagtgggtcttgaggtc
cagggctcagggggtgtggctgagacacggatcgtgcgcctgattgagccactgaaagaa
aggaggcggattcttctggcctccaaagaaatgcaccaagtcacgcaggacctagaagat
gagattctgtggattcaagagcgtttaccactggcatcctctacggaatatggcaccaac
atgcagagcgttcagcagcttgttaaaaaccatgaggctttgcagatggagatgcaggcc
agaaaggggcgcgtcgaagaggtgctggagagagccgaggcagtcgccgcccttcgcact
ccggaggtggagatcgtccgagagggagcaatgcacgtgaggcagctgtgggaggtgcta
caggtggaggcggagcgccgtacggtcatgctggatgcagtaagccacgcccagcagtac
tacacggaggcagccaaagcagagtcgtggctcagcgggcaaaagcttcatgttctcaat
aaggagaacggcagtgatgaagccagcacattacggctgctgaaggaacagttggctcta
gagcagaaggtggagacttacgcagagactgtgggattcctgtctcagcagtgccggcgc
atgttggagctgggacaccctgacagtgagcagatcaccaagcagcaggcgcacatcgat
cggctctacgtctccctaaaggacctggtggagcagaagaaaaccaagctggagcagcag
tactggctctaccagctaaagaaggaggtggaggctctggagaagtggatctctgagaga
gaagctgtagccagctctactgaactcggccaggacctggagcatgtcacagtgctgcag
gagaagttcacagagttccgggctgaaacaagcgctgtaggtcagaggcagatggactcg
gtgaacaagatggtgaacgagatgatcgactgcggccacgccgacgccgccaccatcgct
gagtggaaggacggcctgaacgagtcgtgggccgacctgcaggagctgatggagaccaga
gcacaaatgctcgctgcatcacatcagctccacaagttcttcaccaactgccaggaggtg
ctgttgcaaattgaggggaagatgaggcagttaccagaggtgcgttcgtgtcaggtgagc
accgccaaacctggcaccctacagagactgctgcactcctttgaacactctctgcagctg
cttgtttcacaggtgcggcagctgcaagagaacgcatctcagctgcgtgcgatctacgcc
ggcgagaaagccgacaccatcttggtccgtgagcaggaagtgatgcatgcatggaaggag
ctccttctggcgtgtgagggtagccgcgtgcaggttaccacggtgacggacaaaatccag
ttcttcgccatggtgcgtgagctcagcatgtggactgatggcatcattggacaaattggc
ccggtcgaggacgcacgggacgtgtcctctctggagtgtatgatctcccagcaccaaagc
ctgaagagtaaaatggagagcaaaagcaagagtttcatgcactgtgtggagatgggcaag
atgcttctcgcggcacataatcctgcagctgaggaggtgaaggagaagttggagtatgtg
atggcgaagcagaaagatctgaatgataagtgggagcagcactgggagaaactccagcgc
atgcagcagcggatacaatccgcacagaaaagcaaggctgaagggacgtggcacgcgacg
aaggagtcgctgagcagcggtggcgaggcagagggcggagctgacgaggtggagcagctc
attcgccgacatgaagcgttccgcatggcagcgtcttcgtggaaggagcacttcagctct
ttacgacaggcagaaaaattaaaagaagagcaaagcaagcagtccaccacatcatctctt
ctcaacagacagatgtttcctctgtcttgcctcgtgcccagctcttcctcgtcgtcctct
tcctcctctcttttcaggagccctttgcaggacatgctccttgagcccaaatctgttcca
gaccttacacataccccacacgcttttgcccagaggctcggatctgcgctaaatccttat
gttcccgtcatgaatggctctccctaccacaggctcagccaacaagtcggggacctgggc
acaaacagctccagtcaaactgggttaaaccaacaaggtgttccgggggtggacagttca
agttacactggcctaaaccaagttggcatgttaggctcagacagctccagctacaccgga
ttaaaccaacagggtgtcacaggggccaatggccttaacccccttagtggtctgggtgtg
gctgaacccaaaaccacatatgcctggcagcagtttaaagctgacttgcagcccaggatc
aaccacatgcaccaggctgtaggtcctctgctggaagcccatgctgggcacctggtccca
gcaggtgtgccaatgggaactgaagcatccctggagctgctccatgggcggttgcagagg
gacccccgcggaagccgctcagacccgcagatggaccacctgcgcagggagagggagtac
cggctcgggcggcacacctcaagtgagcaggagattcaggcgcgcctcaacgagctgccc
atgattgtgcgccaggaaaggcaccagcgacgcagactggagcgccagtcatccagcgag
caagagggcagcagcaggcacagacttcagaaacatgaatctagtgaccaggagtcggga
aaagaagggtcagacaagaagcagacaggggaaaaacgctccaccatggctgagattgtt
gaacaggtgcaggagagagaagcatgccaagcgaggggagaggtgtatcgtcctagcagc
agtctttccgctcctgtctctcgtcttgaccggcctcgagctcgtgaccgaccaaaacca
cgtcgacgaccacgtcctaaagaacccgaggagacgcggcggtcacggtcagccccggct
cagagtgcgccgagcacaccacagccacccacccataccgtacaccaggagggcttcctg
taccgcaaacacgaagaggagggcaaggaaaagagcccaaatagcaagtcctgggtgaac
ctgtactgcgtactcaacaaaggtgagatcggcttctacaaggatgccaggaacacgaca
accccatacaatgatgagcctctcctcaatctagccatctgtaccttcgacaccaccaac
ggatacaaaaagaagaagaatgtcttcattctgaggagtgaaaccgatggggactatatc
ttcctggccaaagacgaggaggacctgaagcgttgggtgaacagcataaatgccagccta
aatgaaatcgaggagatcgccaaatgggagaaacccaccacctcctccaccgaccccgac
aaatcagaacgcaaggagcgctccgagggggcggagccgtcagagaagtcagaacgctcg
gaccgatcggacaagcgagaaggggagaaaagctcagaaagctccgaaaagagggacacg
ttggagagagtgaggatggagcgacgagggagggagcgaggagagagggagagaggagag
cgaggagaaagaggagagcgagaagaaagaggagagcgaggagaaagaggaaccagagag
aaggaaagagaaagagagagggagagggagaaaggagatcggagttccaggggttcgagc
acctcggggaaaagtaaatga
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