Silurus meridionalis (southern catfish): 124379357
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Entry
124379357 CDS
T08004
Name
(RefSeq) matrix-remodeling-associated protein 5-like
KO
K24400
matrix remodeling-associated protein 5
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
124379357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
LRR_8
C2-set_3
C2-set_2
Sp38
LRR_4
Ig_C17orf99
V-set_CD47
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
124379357
NCBI-ProteinID:
XP_046695633
LinkDB
All DBs
Position
3:complement(31551130..31566319)
Genome browser
AA seq
2452 aa
AA seq
DB search
MKSSEGRRRRMEVLRWSVLVTLTLLLVFPDAAVPCPHPCTCYVPSEVHCTFRSLTLVPSG
IHRAVQRMNLGFNSILRLDQESLAELRKLELLMMHGNNIHQIPDGVFRDLISLQILKMSY
NKVKVITGYSLSGLTHLVRLHLDNNHIEFIHPDAFRGMTSLRLLHLEGNRLQKLHPSTFS
TFSLLNYFPVSTIKHLYLADNYLTSLPREMLRNMPHMENLFLYGNPWTCDCRLDWLQDWT
TRHSGVMKCKRDKAHAKVQVCPVCSSPQHLRGKQLSEPGVDFRCTGPVISNSPGKDISHE
EHLSELLSLEDFKPPIGNITLNLSDEHGTTADLTCQVVQPRESAEIRWNYTESLQIAANM
TLSVDLECPMDREKYTNLWRLLAYYSEVVLHLRREIMLSKEPKLSYRYKQDIERDAHYYT
GVRANVLSHPSWLMQSFVNIQLNRPYSTFKTVKLIFTTQMSSTTDSEQARWQKRSWVMIK
HNNATQTTFSSVVGGMIEMDCKVVSSGAPSIHWMLPDGSKVRASSSSTNNHRSVLSTGKL
LIKAVDHSNSGVYYCIAEVLGDVDVLPFRLSVVESSRPLADAEVMIASFEKFAGESVYLP
CNTTASPDADVNWIFPDDSILSAHANSSKGFIFSNGTLFIPQCRPDDNGNYKCVALNQHG
EDTVSAKLTVTRRQGTQPLRRYPMRPLSAAGVSTKVSAFLEDTEESSGDDTDQKRMLSNR
RFTNQKRGPQWRSRVYQGRNVQRHFPGHRKPIKKVLNGQQRKDVFVNRRKINKSKSKIDP
QRWADLLAKIREKTVQNTTTLSSYPGVTVERVQTVGPESHNNIEGSSPDDVYLLKEESNV
IITSENHNILTVTSPSLLHQITAPESSVRSDEVTVRPAKSTAVTNYLITEINILERNHLN
ALTTSTSYQEERQQNHLENSPAAPNFELKNELGISLMSTDLDESYPTSEKDGAQWIIHST
VETTKNISDNIIKQRAPSHPYTRTPWNSRRRFGNRGRINRLRLRPSSPLITNRSQLFTTP
KTTGTPNQSITATTSATLTAGTSAYSTAASITSSQYLKSLRDNNRNDHYQTNILLLADKI
NPLDNKLETDEFSTLQTTEPSQSVQYGLHHALHVTPAGMTVITSQTANKDTTKESWQNMQ
TFSKELWINYHVAFTAQPEADYETLAATQGEFMTRHSALKPSQMSVTEDDMSPDSSSLHN
LKSTQQSVKPVTAPVKPFPPTVTLPHEGTSKAGDFLKNSLSDSSMKFNQTGFKTTTLQPV
LEKYNSVSPIRAPGPEVGDAELLSPNTSKTSGIISTTSVSTMTPPTSKYDSLITAKLLTT
ATTTTTTPSITTTESGFNAPITTTGLEKTTSLKHSIPTADNRIPFHSKNPPTNHIPDLNH
GKTFLHKFPNQRHPFIIQKTPSDTNPSVDIRAVGTITSRSTPITFTTFTQTTITTPTPSA
KSVGRMQTGVHTPHQHTGRNDALPQPPYVPVLRAKPRITSDNLTTVAVNAETDVQFPCNS
VGEPKPFLTWTKISTGALMSANTKIQRFEVQPNGTLVIRNVQLQDHGQYLCTALTQYGTD
RMVVTLIVLTQIPKILLPLQHDMMVYMGDRVNLECQAQGLPRPKISWVLPNQTVVQAVSS
REQRLMLFSNGTLHMEQTSYLDTGIYKCIASNVAGAAAISIRLHVTALPPIIQQRRQENQ
TVSEGKTLYIHCSAKGAPYPVIRWITFAGMQIRPSQYINGNLFVFPNGTLYIRNPTEKDS
GTYECVAVNAVGVAKRSVNVKVKRIFSTAKITFTSPLSTDVSYGSYLKLDCNASGSPEPK
IVWKTPAKKLVDAHFSFDQRIKVFSNGSLIIKSVTEKDHGDYLCLARNKDGDDFVLLKVN
VRMKAARIEQKQLNNHKILYGGDLKVDCVASGLPNPEIKWSLPDGTMVNSVIQSDGSGGR
TKRYVVFDNGTLYFNDVGMKEEGDYTCYAENQIGKDEMKIRIRVVAAAPTIHNSTFEVIR
VPHGETVSLTCQAKGQPSPTITWFSPNNHIVTLLASNKYRLITDGSLEIHNVHRLDSGNY
TCLAKNTAGLDKKVVSVHVVTSVPIINGAKLPMTRAEETAEKDQRVLLHCKAEGTLYPQV
MWIMPKNVVLPAPYYSDRVVVHRNGTLDIRNLHKSDSAQLLCVARNEAGEARLQVHLHVT
EQAEKPKLKSIATETVRITSGVSVILNCSMEGKPHPEITWFLPNGTILSSGTSNFHFEHL
PDGALVIREPSDSEAGIYRCVGRNRAGSVERTVTLESNQKPIIQSKYTSLVSIINGENLQ
LNCLSSGNPNPKLTWTLPNGEILARPWKTGRYVIFNNGTLTVQQASVYDRGTYRCNSANE
HGVSSMTVAVIVIAYPPRITSGPSAVTYSRSGHAIKLDCLAIGIPKPEIVWEMPDKTQLK
SGPHIRLYGNRYIHPQGSLVIQNPSSRDNGFYKCTAKNVIGSDIRETYVYVF
NT seq
7359 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcctcagagggacggaggaggaggatggaggtcctgagatggagtgtgttggtg
actctgacgttactcctcgtgtttcccgatgctgccgtgccgtgtcctcatccctgcacc
tgctacgttccttctgaagttcactgcaccttccgctctctcaccctcgtcccctcggga
atacacagagcagttcagcgcatgaatctcgggtttaacagcatccttcgacttgatcag
gaatctttagcagaactcaggaaactggagcttctgatgatgcacgggaacaacatccat
caaatcccagacggagtttttcgagacctgatttcgttacagattctgaaaatgagttat
aataaagtgaaagtgatcacaggatacagtctgtctggtctcacgcacctcgtaaggctg
cacctggacaacaaccacatcgaatttatccatcctgatgccttcagagggatgacatca
ctccgtctgcttcatctcgaagggaaccgtctgcagaagcttcatccttctacctttagc
acgttctccttgttaaattatttccctgtgtccactatcaaacacctgtacctggcggac
aattatctaacgtccctgccgagagaaatgctgagaaacatgcctcatatggagaacctt
tttctgtatggaaacccctggacctgcgactgtaggctggactggcttcaggattggacg
actcgccattcaggtgttatgaaatgcaagagggataaagcacatgctaaagttcaggtt
tgtccagtgtgttcctcaccacagcatctgagaggaaaacaattatctgaacccggtgtg
gatttccgatgcactggaccggttattagcaactctccaggaaaggacatttctcatgag
gaacacctcagcgagcttctttctctggaagacttcaagccaccaataggaaacatcacg
ctgaacctgtcagatgaacatggaaccactgcggatttgacctgccaggttgtacagccg
agggagtctgcagaaatcaggtggaattacactgagagtttgcagatcgctgctaacatg
actctctctgtggaccttgaatgcccaatggacagggagaagtataccaacttatggaga
ctgcttgcatactacagcgaggtcgttctgcacctgcgcagggagatcatgttaagtaaa
gagcctaaactgagctacagatacaaacaggacattgagagagacgcacactattacaca
ggagtccgagcgaatgttctctcacatccatcctggctcatgcagtcattcgtgaacata
cagctgaacaggccctactccaccttcaagactgtgaagcttatttttacaactcagatg
tcttccaccacagatagtgagcaggcaaggtggcaaaagagatcgtgggttatgatcaaa
cacaacaatgccacccaaacgacctttagttcagtggtgggtggtatgattgagatggac
tgcaaagtagtgagttctggagctccgagcattcactggatgttaccggatggctcgaag
gtcagggcatcctccagtagcacaaacaaccatcggtctgttttaagtacgggaaaactt
cttatcaaagcagtggatcattcaaactccggcgtatattactgtattgctgaagttctg
ggagacgtagatgttcttccgtttcgtttatcagttgttgaatcctccagacccctcgca
gatgcagaggtcatgattgcaagtttcgagaagtttgctggggaatctgtttatttgcct
tgcaataccacagcatcaccagatgccgatgtgaactggatttttccagatgacagtata
ttgagcgcccacgcaaactcttctaaaggttttatcttctccaatggaacgctcttcatt
cctcagtgcagacctgatgataatggaaattacaaatgtgtggcactgaatcagcatggt
gaggacaccgtttcagcaaagctcactgttacgagacggcaaggaacgcagcctctccga
cggtatcccatgaggcctctgtctgcggctggtgtgtccacaaaggtcagcgcattttta
gaagatacggaggagtcatcaggtgatgatactgaccagaagagaatgctgtcaaataga
cggtttacgaatcaaaagaggggaccacagtggaggtcccgagtctatcaagggcggaat
gtgcagagacattttccaggccacaggaagccaattaagaaagttttaaatggacaacaa
aggaaagatgtttttgtgaacagaagaaaaataaacaaatcgaagagcaaaattgatcca
cagagatgggctgatcttttggccaaaatccgtgagaaaacagttcaaaataccacaaca
ctgagctcttacccaggtgttacagtagaaagggttcagactgtaggtccagaatctcac
aataacatagagggatcttctccagatgatgtgtacctactgaaggaagagtcaaatgtc
attatcacgtctgaaaatcataatatcctcacagtcacatctccttcactgctgcaccaa
ataactgctcctgaatcaagcgttagatcagatgaagtgacagtgagacctgcaaaatcc
acagctgtaactaattatcttatcactgagataaatatcctggagagaaaccatttaaat
gctttaactaccagcacttcatatcaagaagaaagacaacaaaaccatttggaaaatagt
ccagctgctcccaatttcgagttaaagaacgagctaggaatctcactgatgtctactgat
ctcgacgaatcctatccaacaagtgaaaaagatggtgcacagtggattatacacagtaca
gtagagactaccaaaaacatttcagataacattataaagcagagagctccttctcatcca
tataccagaaccccttggaactctaggaggcggtttggaaacaggggacgaatcaaccga
ttaagactaaggccatcttcgcccctaatcactaacagatcacagttatttacaacaccc
aagaccactggaacacccaaccaatcaatcactgcaacaacatctgccacattaacagca
ggaacatctgcctattccactgctgcatccattacttcttcccaatacctgaaatcccta
agagacaacaatcgtaatgatcattatcaaacaaacatcttgctgttagcagacaaaatc
aatccacttgacaacaaattggagacagatgaattttccacactccagactaccgaacca
agtcaaagtgtccaatatggattacaccacgcactccacgttacaccagcaggaatgact
gtgatcacatctcagacagcaaataaagacacaaccaaagagagttggcaaaacatgcag
acattctctaaagagctctggataaattaccacgttgcttttacggctcagccagaagca
gattatgaaactcttgcagcgactcaaggggagttcatgaccagacattcagccctaaaa
ccatctcagatgtctgtcactgaagatgacatgagtcctgactccagtagtctgcacaac
ctcaagtccacacagcaatctgtcaaacctgtaactgccccagtcaaaccatttccaccc
acagttacactcccacatgaaggcacttctaaagctggagattttctaaagaattctctt
tctgattcttccatgaaatttaaccaaactgggtttaaaaccacaaccctccagcctgtt
ctggagaaatacaattctgtttctcccattagggctccaggcccagaggtgggagatgca
gagttgctgtcgccgaacacaagcaagacttctggtatcatttcaacaacatctgtgtca
acaatgacaccaccaacctctaaatacgatagtctaataacagcaaaacttctcacaaca
gcaacaacaacgaccacaacaccctcaataacaaccacggagtctggatttaatgctcca
attacaaccactggtttagaaaaaacaacgtctttaaagcacagtattccgacagcagat
aacagaattccatttcactcaaaaaatcctccaacaaaccacattcctgatctgaatcat
ggaaaaacctttctgcataaatttcccaatcagagacacccatttatcatccagaaaaca
ccttcagatacaaatccatcagtggacatcagagcagttggaacaataacatcaagatca
acacctataacttttacaaccttcactcagaccacaattacaactccaacaccatctgca
aagtctgttggcagaatgcagacaggtgtacacactcctcaccagcacactggcaggaat
gacgctcttcctcagccaccatatgttcctgtactgagagcaaagcccagaatcaccagc
gataatctcaccacagtcgctgtgaatgctgaaacagatgtgcagtttccgtgcaattct
gtgggggaacctaaaccttttcttacctggaccaaaatctctacaggggctcttatgtca
gcaaataccaagatccagcgatttgaggtccagcccaatggaacgttagtcatccgcaat
gttcagctccaggatcatggccagtatctctgcactgctctgactcaatatggtaccgat
aggatggtagttaccttgatagttctgacacaaataccaaaaatcctgctcccattgcaa
catgatatgatggtgtacatgggggaccgtgtcaacctcgagtgtcaagcacaaggtctt
ccacgtcccaagataagctgggtgcttcctaaccagacggtggtgcaagcagttagcagt
agggagcaaaggctgatgctgtttagcaatggcacactgcatatggagcagactagctat
ctagacactggaatctataaatgcattgccagtaacgtggcgggagctgcagcgatatca
atccgccttcacgtcactgcccttccaccgataatccagcaacggcgacaggagaaccaa
accgtttctgagggtaagaccctgtacatccactgcagtgctaaaggagccccatatcca
gtaatccgctggatcacctttgctggcatgcaaatccgcccttcccagtacatcaatgga
aatctctttgtatttcccaatgggacgctatacatccgtaaccctacagaaaaagactcc
ggtacctacgagtgtgttgctgtaaatgccgtaggtgtggctaagaggagtgtgaatgtg
aaagtgaagcggattttctctacagctaaaatcacctttacatcacctctaagtactgat
gtcagttatggcagctatctgaagttagactgcaatgcttcaggaagccctgaacccaaa
atcgtgtggaaaacaccagccaaaaaactcgtagatgcacatttcagcttcgatcagaga
ataaaagtcttcagtaatggcagtctcattattaaatcagtaacagaaaaggaccatgga
gactacctctgtctggccagaaataaagacggagatgattttgttctcctgaaagtgaat
gtccgaatgaaagccgccagaatcgagcagaaacagttaaataatcacaaaattctttac
ggaggagatctgaaggtggactgtgtggcatcaggtctccccaaccctgagatcaaatgg
agtcttccagacggcaccatggttaacagtgtcattcagtccgatggcagcggagggcgc
acgaagaggtacgtcgtctttgacaacggaaccctgtatttcaatgatgtgggtatgaag
gaggaaggagattatacatgctatgctgagaatcagattggcaaagatgaaatgaagatc
cgtattagagttgtggctgctgcaccgactatacacaacagcacttttgaggtgatcaga
gtgccccatggggaaacggtatcacttacttgtcaggcaaaaggacaaccttcaccaaca
ataacatggttttccccaaacaaccacatcgtaactctactagcatcaaataaataccgt
cttatcacagatgggagtcttgaaatccacaatgtccaccgtttggacagtggaaactac
acatgcttggctaaaaatacagccggtttggacaagaaggtggttagcgtgcacgttgtg
acttcagtgcccatcattaatggagcaaaacttcccatgacgagagcagaagagaccgct
gagaaggaccagcgagtgctcctgcactgcaaagctgaaggaacactgtatccccaagtc
atgtggataatgcctaagaatgttgtgcttccagctccctactacagcgacagggtcgtg
gtccatcgcaatggtactcttgatatccgcaacttgcacaaaagtgactctgctcagctg
ctctgtgtagctcgcaatgaggcaggtgaggccagactgcaggtacatcttcatgttaca
gagcaggctgagaaaccaaagctcaaaagcatagccacagagacagtccgaatcaccagc
ggagtttctgtgatccttaactgctccatggagggaaagccccatcctgaaatcacttgg
ttccttcccaatggaacaatcctatcgagcggaacaagcaatttccattttgaacatctc
cctgatggcgctttggtcattagagagccttctgattcagaagcagggatttaccgctgt
gtaggacgtaaccgtgcaggttcagttgagaggacagtgactctggagtccaaccagaaa
cccatcatccaaagcaagtacacctcattggtcagcattatcaatggtgagaaccttcag
ctgaactgtctgtcaagcggaaacccgaatcccaagcttacctggactctaccaaatgga
gaaatcctcgctaggccgtggaaaacgggaagatatgtcatttttaacaatggcacctta
acagtccagcaggcttcagtctacgataggggaacataccgctgtaattctgccaacgag
cacggagtctcgtccatgaccgttgcggtgatcgtgatcgcatatccaccgcgcattacc
tccggaccttctgcagtcacttatagtagatcaggacatgcgatcaagcttgactgtttg
gccatcggaatcccaaagccagagatagtttgggaaatgcctgataaaacccagctcaag
tcaggcccccatatacgactttacggcaacaggtacattcacccacagggttctctggtc
atccagaacccatcaagcagagacaacggcttctataaatgcacggccaaaaacgtgatt
ggcagtgacatcagagagacctacgtttatgtgttttaa
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integrated database retrieval system
