Silurus meridionalis (southern catfish): 124379362
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Entry
124379362 CDS
T08004
Symbol
usf1l
Name
(RefSeq) upstream transcription factor 1, like isoform X1
KO
K09106
upstream stimulatory factor
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124379362 (usf1l)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
124379362 (usf1l)
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GFIT
Motif
Pfam:
HLH
Tmemb_cc2
bHLH_ILI
Motif
Other DBs
NCBI-GeneID:
124379362
NCBI-ProteinID:
XP_046695634
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Position
25:complement(8744201..8754795)
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AA seq
311 aa
AA seq
DB search
MGSLFLIVTVPLHLLQISKCVTVQQKSPDPQVDVPIMEEGSIATAVDPSAVTTIQSAATY
STEQPIKYVFKTEGNTGQVTYRVIHVADGQMEAQADGTAAVSVVTGFPAAMQDGTPPITR
AVYSQAEGLDTEATEGHYYYPSTISDTAPATIVTNVHAADSLLAQPTSAGQLYVMMSPQD
VLSTTNQSKAETPCSSRDDKRRAQHNEVERRRRDKINNWIVQLSKTIPDCTLDSTKSNQS
KGGILSKACDYIQELRQSNSRLSEELETLERLKLDNQLLRQEVEDWKSKNQMLRNQLRHH
GIVTASSMDPQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgttgttcctgattgttacagttcccttgcatttgttgcagatctccaaatgt
gtcacagtgcaacagaaaagccctgatccacaggtggatgtgccaatcatggaggaggga
tctatcgctacagctgttgatccatctgctgtcacgacgatacagtcagcagccacatat
tctaccgaacaaccaataaaatacgttttcaaaacggagggaaataccggacaggtgacc
tatcgagtaatccatgtagctgatgggcaaatggaagcccaggcagatggaactgcagct
gttagtgttgtgactggcttccctgcagcaatgcaggatggaacacccccaataacacgg
gctgtgtactctcaggctgagggtctggatactgaggccacggagggtcactactattac
ccatccacaatcagtgatactgctccagccaccatagtaaccaatgtccatgcggcagat
tctctgctggcgcagcctacttctgcaggccaactctatgtaatgatgtcaccacaggat
gttttgagcacaaccaatcagagtaaggcagagactccttgctcttcaagagatgacaag
aggagagcacagcataatgaagttgaacgtagacgcagggacaaaataaacaactggatc
gtccagctgtctaaaacaatccctgactgtactttagactcaactaaatctaaccagagt
aaaggtgggatcctgtccaaagcctgtgattacattcaggagttacgccaaagcaattcc
cgattatcagaggagctggaaacgctggagagactaaagttggacaaccagcttctcaga
caagaggtggaagactggaaatctaagaatcaaatgcttcgaaaccagctgaggcatcat
ggtatcgtcaccgcgtcgagtatggaccctcagtga
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