Silurus meridionalis (southern catfish): 124379428
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Entry
124379428 CDS
T08004
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124379428
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124379428
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124379428
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
124379428
NCBI-ProteinID:
XP_046695740
LinkDB
All DBs
Position
25:5949306..5961728
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AA seq
776 aa
AA seq
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MEAFSLETIEEGNKAKATKKDRQAYGKTKAPMDTDLLEDHGDFSCPIRIKLEFSNEVQGI
KTEPDQQERFDIKRLFDAVSSGDINRLQGLEEYLCKTNKKLTNSEYRPNGKTALMKALLN
LKNGENKTVEHLLGIAERMGYLDKLVNAAYTDDYYEGQTALHIAIERRNKRFVELLIQKG
ANVHALACGTFFQPLSETCFYFGELPLSLAACTNQKDIVDLLIGKAELQRTDTLGNTVLH
ALVMVADDSPENTDFVISMYDYILTKDAAKNSQKQRLENIENNQGLTSIKLAAKLGKIRL
IEHILHREFQQEECRYLSRKFTEWAYGPVYASLYDLHSLDTYEPNSVLEIIVYGTEIPNR
LEMLQIEPLNKLLEDKWNRFAHRIFLFKFIAYLVYLTIFTIVCYYREEGKPPFPIRKYRL
ENVEKTIPDGYLLFAGQVIMAIGSLYFFVHVLMNIKRKRPSVKTLLVDGYSELLFLLQAV
FFLLCVGLYFAGKQEYLAFLVLSVALCWVNLLYFSRGTRHMGIYSVMIQRMILSDILRFL
FVYVVFLFGFSAAVVTLLKGNIEESEESKLNNSTVKDKSGRSFFTEDPKEGKDCKKPTYK
TIAFTTLELFKFTIGMGDLEFTEQYEYKHVFFVLLISYIVLTYILLLNMLIALMSKTVEK
MSKESTSIWKLQRAITILDLERYVCCLKTKLRSGVRRNLGKKEEDWRWCIRVEEVNWKKW
NRNLGIISEDPGECNNPIQHVHQRESTRHRFLRDISRRRPNTRIIQETIPLASSPE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggaggctttttctttggagacaattgaggaggggaataaggccaaagcaacaaaaaag
gatcgccaagcttatggaaagactaaagcaccgatggacactgacctccttgaggaccat
ggtgatttttcttgcccgatccgaatcaagctggaattttctaatgaagtacaagggata
aaaaccgagccagatcagcaagagaggtttgacatcaagaggcttttcgatgctgtgtcc
agtggtgacatcaacaggcttcagggattggaagagtatttgtgtaaaacaaacaagaag
ctgacaaacagtgaatatcgacccaacgggaagacagctctgatgaaggctctgctaaac
ctgaaaaatggagaaaacaaaacagtggagcacttgctgggtatcgcggagagaatggga
tatctggataagttagtaaatgcggcatatacagatgactactatgaaggacagacagcg
cttcatatagccattgagagaagaaacaagcgttttgttgagctgctcattcagaagggg
gctaatgtccatgcattggcttgtgggacattctttcagccacttagtgaaacatgtttc
tactttggggagcttccactatctctggcagcatgtactaatcagaaagacatagtggac
ttgctgattggaaaagcagagctacagcgtacagatactctgggcaacacggttctccac
gctcttgttatggtggctgatgacagccctgaaaatacagactttgtcatttccatgtat
gactacattcttaccaaagatgccgctaaaaattcccaaaagcaaaggctggagaacatt
gagaacaatcagggactgacttccatcaagctggctgcaaagctaggaaaaattaggttg
attgagcatatactgcatcgtgagttccagcaggaagagtgcaggtatctgtcccgaaag
ttcactgagtgggcatatggcccggtgtatgcttcactatacgacctgcactctctcgac
acctacgagccaaactctgttctggagataattgtttatggcacagaaatccctaatcgt
ctcgaaatgctccaaattgagccacttaataaactcctggaagacaaatggaacagattt
gcccaccggatattcctgttcaagtttattgcttatctcgtgtatctcaccatcttcacc
atcgtttgctattaccgcgaagaaggaaaacccccatttccaatcaggaaatatagattg
gaaaatgttgagaaaacaattcctgatggctacttactgtttgctggacaggtcatcatg
gctatcggatcactctatttcttcgttcatgtgctgatgaatataaagagaaagaggcca
agtgtaaaaaccctgctggtagatggctattcagagctgctttttttattacaggctgtg
ttctttctgctctgtgtggggctgtattttgctgggaagcaggagtatcttgccttcctg
gtactcagtgtggctctgtgctgggttaatctgctctacttctctagaggaacacggcac
atgggcatctacagcgttatgattcagaggatgatccttagtgacatccttcgcttcctt
ttcgtctacgtggtcttcctctttggattttcagcagctgtggtgactctactcaaaggt
aacattgaagaatctgaggagtcaaaactgaataacagcacggttaaggacaagagtgga
cgctctttctttacagaagatccgaaagagggaaaagactgcaaaaagcccacctataaa
accatcgccttcaccactctggaactgtttaagttcactataggcatgggtgacctggag
ttcaccgagcagtatgagtataaacatgtgttctttgtgctgctcataagctacattgtg
ctcacttatattctgctgttgaacatgctgattgctctgatgagcaaaactgtggagaag
atgtcaaaggaaagcaccagtatctggaaactacagcgtgccatcaccattttggatctg
gagagatatgtgtgctgtctgaagacgaagttgcgttcaggagtaaggaggaacctgggc
aaaaaagaggaggactggcgctggtgtatcagagtggaagaagtcaattggaaaaaatgg
aaccgcaacctgggcatcatcagtgaagatcctggggaatgcaacaatccaatccaacat
gtacatcaaagagagtccactcggcacaggttcctacgcgacatcagtcgacggagaccc
aacacacgtataatccaggagacaatacctctggcatccagcccagagtaa
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