Silurus meridionalis (southern catfish): 124379437
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Entry
124379437 CDS
T08004
Symbol
si:dkey-34e4.1
Name
(RefSeq) carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein
KO
K16513
carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124379437 (si:dkey-34e4.1)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
124379437 (si:dkey-34e4.1)
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GFIT
Motif
Pfam:
PID
DUF4628
CENP-Q
Motif
Other DBs
NCBI-GeneID:
124379437
NCBI-ProteinID:
XP_046695759
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Position
25:complement(12061942..12115338)
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AA seq
591 aa
AA seq
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MPGRNRYNLVDDAADSRVPLHNDEAFQHGINFQAKYIGSLDVPRPNSRMEIVAAMRRIRY
EFKAKSIKKKKVNMVVSVDGVKVLLRKKQKRKEWTWDESQMLVMHDPVYRIFYVSHDSQD
LKIFSYIARDGSSNTFRCNVFKSKKKSQAMRIVRTVGQAFEVCHKLSLQAADGQMDRLAI
GDSGKSEDESPSTGHELTGAEHISGIEMEMKSLPASACDQAITDVLQSLSELNMVKPGQD
LEGMPLHSLSPSSPRSLSLTPLADQHQLQLLQQQVLQQQQQAQVAVAQVQLLKDQIAAET
AARMEAQARSHQLLLQNRDLLQHIALLVQHVSELEAKVNGYAKNEDWRRSSSCSLSLNLK
NHYSSDQPITSTPAGDVQVSLTTPYSMMCAESYLSLIRTGTSHAANGMQANLGHKQRMGS
ASNDFTKFNSAAVDQRVQEIIPKLDPPPPPVNRKRPNRTGSETASSLAFSSTFPDVTPCS
VSSADLGNDFSASFSASEDSGMRSDNKPSGDDLFEDRNSALLSTSSTCSSLPEDHPLAGT
PPRSATPINYEHTIPFSSPLNKTCLHISLSEDELLDDGIFPTSSSLSSSLS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcctggccggaacaggtacaacctggtggatgacgcggcggactcgcgcgtgccgctg
cacaacgacgaggcgtttcagcacggcattaatttccaagccaagtatattggaagtctg
gatgtcccgagacccaacagtcgcatggagatcgtggctgctatgcggagaatcagatac
gagttcaaggcgaaaagcatcaagaagaagaaagtgaacatggtggtctcggtggacggc
gtaaaagtgttacttcgcaagaaacagaagaggaaagaatggacatgggatgaaagtcaa
atgctagtgatgcatgacccagtatacaggattttctatgtgtcccatgactctcaggat
ttaaagattttcagttacattgccagagatgggtccagcaacaccttcagatgcaacgtc
ttcaagtccaaaaagaagagtcaggcaatgcgtatagtgaggacagtaggccaggccttc
gaggtgtgccataagctaagtctgcaggctgctgacggacagatggacagacttgcaatt
ggagacagtggaaaatctgaggacgagtcacctagtacaggccatgagttgactggagct
gagcacatcagtggcatagaaatggagatgaagtcgctgccagccagcgcttgcgatcaa
gcaattactgatgtccttcagagtttatcagagctgaacatggtgaagccagggcaggat
ttagaggggatgcctcttcactctttgtctcccagcagccctcgctctctgtctctcaca
ccattggctgaccagcaccagctgcagttattacagcagcaagttcttcagcagcaacag
caagctcaagtggctgttgcacaggtgcagctgctgaaggatcagatagcagcagagacg
gctgccaggatggaggctcaggccaggagccatcagctgctgctgcagaatcgagacctg
ctgcagcacatagcgcttttggtccagcatgtcagtgagctggaagccaaagtcaacggc
tatgcaaagaatgaagactggagaagatcgtcatcctgttctctctctctcaacctcaaa
aaccactacagttcagaccagcccatcacctccacgccggcaggagacgtccaagtctct
ctcacaaccccttatagcatgatgtgcgctgaatcctacctcagcctgatcagaacagga
acgtcccatgcagccaacggcatgcaagcgaacctaggacacaagcagagaatggggagt
gcaagcaacgacttcacaaagttcaattcagcagcagtggatcaacgggttcaagaaata
atcccaaaactggacccgccccctcctcccgtcaaccgaaagcgaccgaacagaacagga
tctgaaacggcgtcgagtctggccttcagctcgaccttcccagacgtcacaccgtgttcc
gtttcttcagctgacctcggtaacgactttagcgcctcgttttcggcgagcgaagattct
ggcatgcgctctgacaacaagccgtccggagatgatctgttcgaagatcgcaactccgcc
ctcctctctacgtccagcacgtgcagcagtttgccagaggaccacccactggctggaacc
ccgcctcgttcggccactcccatcaactacgagcacacgattccgttttcatcacccctc
aacaaaacctgccttcacatcagcctcagcgaagacgagcttctggacgatgggatcttt
cctacatcaagttcactcagtagctcacttagttag
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