Silurus meridionalis (southern catfish): 124379491
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Entry
124379491 CDS
T08004
Symbol
ltbp3
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 3
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124379491 (ltbp3)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
124379491 (ltbp3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
124379491
NCBI-ProteinID:
XP_046695813
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All DBs
Position
25:15505557..15541790
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AA seq
1261 aa
AA seq
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MRPVTLPLLLFACLALRRPAACLERVSARERFKVVIAPLICKRTCERNGHCRDTCEHGNN
TTLIGENGQAADTLTGHGFRVVVCPLTCVNGGVCSNRTHCLCPPGFTGRLCQFPLRTQAS
RGNKQPFYTLQVRPDGAGLSDSSGSAGRQQLTHTHFTLPLPQGTGHHSSEVQFNVRVHHS
PDTSVVIQSFDHSEAKLPKGVTRLPPLTQKPRGRCFQETTPKQACSSNPLPGLTNQEDCC
GSVGNSWGQNKCYKCPKLPYAGKSQTIIEEFGSTCPQGYKRLNRTHCQDINECMMQGVCQ
NGECLNTQGSFRCTCKPGYVLKDRTRCVVVDQGPCFLIVSEAGRCEYALSTNISRELCCC
TVGKAWGSNCDRCPQDGTASFIKICPAGKGMSYLHFRSTLAIQPDFPLLPHKEIKPPEVP
VQVTTPMQLQPISTHVPRVPVLIPRPTTHPIIHIPREKETLAVAQTQVSQVDECKLNRNI
CGQGECINTHNGFTCQCKAGYRPHTQRKSCVDENECEGEPCGHGRGTCINTVGSYRCNCH
PGNQLIGHHVKPRCVDINECSTPDICGIGGHCVNLPGSYKCDCVPGFRSKSRRQPVCEDI
NECLDPATCPDAQCENTVGSYECIPCQPGHKVHGGVCYDVNECQKRGVCVNGRCENLPGT
YRCLCNEGFRPEADGKSCQDFNECQDTHLCANGHCINTEGSFQCQCYPGYQPTQEGSHCE
DINECERASNCQRGRCINTMGSYRCECQKGYMLVNGRRCQDIDECEVDRSLCQPHGVCEN
RQGGYVCVCDDGFILAEDKHSCDEVVQDVDNKKECYLNLDDTVFCDSVLATNVTKEECCC
SVGVGWGDHCEIYPCPVYHSDYETDALPTAPTRPYHSLCPXGRGFYLEEGLMEYGLPVHR
DIDECVLFANEICKEGRCMNTQPGFECYCQQGFYYDGNLLECIDVDECHEESLCTNGHCV
NTRGSFYCTCNTPWTPDSTNKKCILPTDLGVNECQDPSNCKNGHCVDTQDSYYCICTSPW
ILGTDRNSCVTPEEQADVNECLDPSYCRNGRCVNTPGSFHCICAQPLTFSAALKQCVYDD
RTAAHKDVCFRDVDEDLICTVPQPRMAVTYSECCCHYGNGWGPECRTCPQRNSVIFNKLC
AMNLETESDGDTDFIAPFSYNPERDSSEEDSDECSCANGRCVRSYLGTMCECNPGFRLDH
SRTRCVDIDECMERLSGIVRLNPCKNARCVNTIGSFKCICKNGHCVHRHSTRHVYTHKNT
K
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccggtgacgctgccgttgctgttgttcgcctgtctcgcgctccggaggccggcc
gcgtgcctggagcgcgtgtccgcgcgcgagcgcttcaaggtggtcatcgcgccgctcatc
tgcaagcgcacgtgcgagcgcaacgggcattgccgtgacacgtgcgagcacggcaacaac
accactctgatcggggagaacggacaggccgctgacaccctcacaggacacggcttcaga
gtcgtggtgtgtcccctgacgtgtgtaaatggaggtgtgtgtagtaaccgtacacactgt
ctctgcccaccgggtttcacaggcagactgtgccagtttcctctccgcactcaggcctca
cgcggcaacaagcagccgttctacactctacaggtgaggccagatggtgcgggtttgtca
gattcaagtggatcagctggacgccagcagctcacacacacacactttacactgccactg
ccccagggcaccggccatcactcatctgaggtgcagtttaacgtacgtgtccatcattcg
cccgacacctccgttgtcatccaatctttcgaccattccgaggccaagcttcctaaaggt
gtgacacgccttcctccactgacacaaaagcccagggggcggtgctttcaggagaccacg
cccaaacaagcttgtagcagtaaccctctccctggtctgactaatcaggaggactgctgt
ggcagtgtaggaaattcctggggccaaaacaaatgctacaagtgtccaaagctcccatat
gccgggaagtcacagacgataatcgaggaattcggctccacatgccctcaaggttacaaa
agattaaaccgaacacactgccaagatattaacgagtgtatgatgcagggtgtttgtcag
aacggtgagtgtttgaacacacagggaagttttcgctgcacctgcaaaccaggatacgtc
ctgaaagacagaacgcgctgtgttgtggtggaccagggtccgtgtttcctcatagtgtcc
gaggcgggtcgttgtgaatacgctctctccaccaacatttcacgagagctctgctgctgc
accgtgggcaaagcctggggctccaactgcgacagatgcccgcaggacggcaccgcctcc
ttcattaagatctgtccggcaggaaagggaatgtcataccttcatttccgcagcactttg
gccatccagcccgacttcccgcttttacctcacaaggagatcaaaccaccggaagtgcct
gtccaggtgaccacacccatgcagctccagccaatcagcacacacgtccctcgtgtccca
gttcttattcctcggccgacgacacatcccataatccacattccacgcgagaaagaaact
ctggcagtggctcagacgcaggtctcgcaggtagacgagtgtaaactgaacaggaacatc
tgtggtcaaggagagtgtataaacacacataatggcttcacgtgtcagtgcaaagctgga
taccgtcctcacacccagaggaagagctgtgtagatgagaacgagtgtgagggggagccc
tgtggtcatggacggggcacatgcatcaacaccgtcggctcgtaccgctgcaactgtcac
cccggcaaccagctgatcggacatcacgtgaagccgcgttgtgtggatattaacgagtgc
tcaacaccagatatctgcgggatcggaggtcactgcgtcaacctgcccggctcgtacaag
tgcgactgcgtgcctgggttcaggagcaaatcacgaaggcaacctgtgtgtgaagatatt
aatgagtgcttggaccctgctacttgtccagatgcacagtgtgagaacacagttggatcg
tatgagtgtattccctgccagcctggacacaaggtgcatgggggagtgtgttacgatgtg
aacgagtgtcagaagagaggagtgtgtgtgaacgggcggtgtgagaacttacccggaacg
taccggtgtctgtgtaacgagggcttccgacccgaggctgacggcaagagctgccaggat
tttaatgagtgccaggacacccatttgtgtgcgaatgggcactgcataaacacagaaggc
tcgtttcagtgccagtgttaccctggataccagccgacccaggagggcagccactgcgag
gatataaatgagtgcgagcgagcgtccaactgccagagggggcgctgcatcaacaccatg
ggctcctaccgctgcgagtgccagaaaggatacatgctggttaatggacgcagatgtcaa
gatatagacgagtgtgaggtggacagaagtctgtgccaaccccatggagtgtgtgagaac
aggcagggcggatatgtgtgtgtgtgtgatgacggctttattctggccgaagacaagcac
agctgtgatgaggtagtgcaggatgtggacaataagaaggaatgctacttgaacctggat
gacacggtgttctgcgacagtgttctcgccaccaacgtgacaaaggaggagtgctgctgc
tcagtgggagtgggctggggggatcactgtgagatctacccctgccccgtctatcactcc
gattatgagactgacgcgctgcctactgcgccaacgaggccttaccactctctatgcccg
ntgggacgaggcttttacctcgaggagggactgatggagtacggcctgccagtgcacaga
gatatagacgagtgtgtgctgtttgcgaatgaaatctgtaaggagggtcggtgcatgaac
acacaaccaggatttgagtgttactgtcaacagggtttctattacgatggaaaccttctc
gaatgtatagatgtggacgagtgtcacgaagagtctctgtgcactaacggccactgcgtg
aacactcgcggatccttttactgcacctgtaacaccccgtggactccggactccaccaac
aagaagtgtatcctgcctacagatttaggcgtaaacgaatgccaggacccgtcgaactgt
aaaaacggccactgtgtggacacgcaggattcctactactgcatctgtacttccccctgg
atcctcggcaccgaccgcaacagctgcgtcacgcccgaggaacaggccgatgtgaatgag
tgcctggacccgtcatactgcaggaacgggaggtgtgtgaacactcccggctccttccac
tgcatctgtgctcagccgctcaccttcagcgccgcactcaagcagtgcgtctacgacgac
cgtacagctgctcataaggacgtctgttttcgagatgtcgatgaagatctgatctgcacc
gtcccacaaccacggatggcagtcacctactcggagtgctgctgccactacggcaatggc
tggggtccagagtgccgcacttgcccccaaagaaattcagtgatctttaacaagctgtgt
gccatgaacctcgagaccgagtcagacggagacaccgactttatagcacctttcagttat
aacccagagcgggacagttcagaggaagactcggacgagtgcagttgtgcaaacggacgg
tgtgttcgctcctacctgggcaccatgtgcgagtgtaacccgggtttcagactggaccac
tcacggacacgctgtgtagatatagacgagtgtatggagcgattgtccgggatcgtccga
ttaaacccgtgcaaaaacgcccgctgcgtcaacaccataggctccttcaagtgcatctgc
aaaaacggccactgtgtccacagacacagcacgagacacgtgtacacacacaagaacacc
aaataa
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