Silurus meridionalis (southern catfish): 124379519
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Entry
124379519 CDS
T08004
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00603
Glycosphingolipid biosynthesis - globo and isoglobo series
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
124379519
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smeo01003
]
124379519
Enzymes [BR:
smeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
124379519
Glycosyltransferases [BR:
smeo01003
]
Glycan extension
FORS blood group (Forssman antigen)
124379519
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
124379519
NCBI-ProteinID:
XP_046695870
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All DBs
Position
25:complement(16441319..16447445)
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AA seq
341 aa
AA seq
DB search
MRFRKIFSLFCLFITCSLLWLIHYNYNYTPSWLRRMLDCREIVTKHINMDLIFPPGVVCA
QPSVHTSRPDVSLSTRWSAPIVWEETFDVAVINNIYKHQNVTVATIIFALGKYVRFLKDF
LESAEQHFMVGYPVHYYLFTDLPNEVPEVNLGEERQLTVIKTPSINRWQEISLKRMKMIE
KLIEEELLYTVDYIFSLDVDTKFHAHWGAESLGDLVAVLHPYLFGFSRKQFTYERRLKSQ
AYIPLDEGDYYYEGAVIGGRPDKVLKLAKTCRMQMEMDQANQIEAVWQEESHLNKYFLYN
KPTKVLSPEYLWNDKKEKPSNMKVVRFSQVDKNYADVRPNP
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcagaaagattttttctctgttttgcctttttatcacctgttcactcctctgg
ttaattcactacaactacaactacacaccgtcctggctgaggcgcatgttggactgcaga
gagattgtaacaaagcacatcaatatggacttgatctttcctccaggggttgtctgtgct
cagcccagcgtacatacgagtcgtccagatgtttccctatcgacacgatggtcagctcca
attgtctgggaggaaacattcgatgttgcggtgattaacaacatttacaaacaccagaac
gtcaccgtggcaaccatcatttttgctctggggaagtatgtacgtttcctgaaggacttt
ctagaatctgcagagcagcacttcatggtgggctacccagtgcattattacctgtttaca
gatcttccaaatgaggttcctgaggtgaatctgggggaggagcgtcaactgacagtgatt
aaaacaccaagcataaaccgctggcaggaaatctcactaaagaggatgaagatgatcgaa
aagctcattgaagaggaactcttatacacggtcgactacatattcagccttgatgttgac
accaaatttcatgcgcattggggggcggagtctctgggcgaccttgtcgccgtgctgcat
ccctacctgttcgggttttctcggaaacagttcacgtatgagcgccgtctcaaatctcag
gcctacatacccctcgatgaaggagactattactatgaaggagccgtgatcggaggacgt
cctgacaaagtgctcaagctggcaaagacgtgccgcatgcaaatggagatggaccaagcc
aatcagattgaggcagtgtggcaggaggagtctcatctgaacaagtacttcctctacaac
aagcccaccaaggtgctctcacctgagtatctttggaatgataaaaaagagaaacccagc
aacatgaaagtggtgcgtttctcacaggtggacaagaactatgctgatgttcgaccaaac
ccttaa
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