Silurus meridionalis (southern catfish): 124379584
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Entry
124379584 CDS
T08004
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124379584 (irx3a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
124379584 (irx3a)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
124379584
NCBI-ProteinID:
XP_046695933
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All DBs
Position
26:8833445..8836855
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AA seq
429 aa
AA seq
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MSFPQLGYQYIRPIYPQERQGIGSARSGSELSPSGTLSNVLSTMYGSPFTAAHTYGAFLP
YSNDLSIFSQLGAQYELKDSPGVQHPAFAHPHPAFYPYGQYQFGDPSRPKNATRESTSTL
KAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRTDEE
GNVYGSDHEGDDGDKRDDEEEIDLENIDTEHIESKDELDEQDELHSDSKLDASCDSEVSD
GYEDLHGPEPKLLKAVVQEGKDAHGDEDAERPDHFHHHHHHLHHHHHLPHSLDLKTQPPS
SDQIKLNPVSNSPPAENNAAPVQKPKIWSLAETATSPDNPRKSPLVNGSSSQAVLPPHRL
VSCPVGKLQNWTSRAFSAHQLALLNSNHYLGLANQASANGLALYTGNRHTEERNVSSETA
HTGTSHPPH
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagttgggataccagtacatccgaccgatataccctcaagaaaggcaa
gggatcggcagcgcgcgcagcgggagcgagctgagtccgtcaggcacgctctccaacgtt
ctctccaccatgtacggatcacctttcaccgccgcacacacctacggagcgttccttcct
tattcaaacgacctgtccattttcagtcagttgggagctcagtatgagctaaaagacagt
ccaggtgtccagcatccagcgtttgcccatcctcaccctgcattctacccgtacggccag
taccagtttggagacccgtccagacccaaaaatgcaacacgggagagcacaagcacgctg
aaggcctggctgagcgagcaccgcaagaacccgtaccccaccaagggcgagaagatcatg
ctagcaatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaacgcccgg
aggagactgaaaaaggagaacaagatgacgtggacgccgcgcaaccgcacagacgaagaa
ggcaacgtgtacggcagcgaccacgagggcgacgacggcgacaagcgcgacgacgaggaa
gagatcgacctggagaacatcgacacggaacacatcgagagcaaagacgagctggatgag
caggacgagcttcactcggactccaagctggacgccagctgtgactcggaagtctcggac
ggctatgaggatttacacgggcccgagccgaagcttttaaaagcagtggtccaggagggc
aaagacgcgcatggggatgaagacgctgagcggcccgatcacttccaccaccaccatcat
cacctccatcatcaccatcaccttcctcattcgttagacctcaaaactcagcctcccagc
agtgatcagatcaaactcaacccggtgtccaactctcctcctgctgagaacaacgcagcc
ccagtacagaaacctaagatctggtctttggctgagacagccacgagcccggacaatccc
cggaaatctccactcgtgaacgggagctcatcacaggccgtcctgcctccacacagactc
gtttcatgcccagtgggcaaactgcagaactggacgagccgtgcgttctctgcgcaccag
ctcgcgctgctcaactcgaaccactatttaggactggccaatcaggcttcagccaacggc
ctcgcgctctacaccggcaacaggcacacggaagagcgcaatgtcagctcagagactgca
cacacaggtacatctcatccccctcactga
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