Silurus meridionalis (southern catfish): 124379602
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Entry
124379602 CDS
T08004
Symbol
gabrb3
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124379602 (gabrb3)
04082 Neuroactive ligand signaling
124379602 (gabrb3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124379602 (gabrb3)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
GABA-A
124379602 (gabrb3)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
124379602
NCBI-ProteinID:
XP_046695994
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Position
1:33933660..34045384
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AA seq
520 aa
AA seq
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MPQWWIFLLSFWSVYGELPFITENNAAMLVNWNAVDGNKKLFAIYDTSANEPGNMSFVKE
TVDKLLKGYDIRLRPDFGGAPVSVGMTIDVANIDMVSEVNMDFTLTMYFQQYWRDKRLAY
SGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA
ACMMDLRRYPLDEQNCTLEIESYGYTTDDIQFYWKGGDNAVSGVSQIELPQFSIVDYKLV
SRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALG
ITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQMQ
KKMAEKAEKANNDRNKYDGNKSVQEGGNCKASGLKQSNQVQGHRHSRGVDSQGNILLTTL
EIHNEVAGNEITTSVSDGRNSTSVMLDNSGIQYRKASGPRRHSQERNAQPKKARLRRRSS
QLKIKIPDLTDVNAIDRWSRIIFPAVFSLFNLIYWLYYVN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgccacagtggtggatcttcctgctcagcttctggagtgtttacggagaacttcccttc
atcacagagaacaatgccgccatgttggttaactggaacgcagtggatggaaataaaaag
cttttcgccatctacgacacgagcgccaatgaaccaggcaacatgtctttcgtaaaagaa
acagtggacaagctcctgaaaggatatgacatccgtcttcgtcctgactttggaggtgcg
ccggtgtcagtggggatgaccatcgatgtggccaacatagacatggtgtctgaagtcaac
atggacttcactctgacgatgtatttccagcagtactggagggataaacgcttggcgtac
tcagggattcctctgaacctcaccctggataacagagtggctgatcagctctgggttcct
gacacctacttcctgaacgataagaagtccttcgtccatggagtgacagtgaagaaccgc
atgatccgccttcacccagacggaacggttctgtatgggctgagaatcactacgactgct
gcttgcatgatggatctgaggagatacccgctagatgaacagaactgtaccctggagatt
gagagctatggctacacgacagacgatattcagttctactggaaaggaggagacaacgcc
gtatccggtgtgtcccaaatcgagcttccgcagttctccattgtggactacaaactggtg
tccaggaacgtcgtcttctccacaggagcttatccacgcctgtcactcagctttaagctg
aagaggaacatcggctactttatcctgcagacctacatgccttccatcctgatcaccatc
ctgtcctgggtctccttctggattaactacgatgcctcagcagcgagagtggctttaggt
atcacgactgtcctcaccatgaccaccatcaacacccatcttcgagagacgctgcccaag
atcccatacgttaaagccatagatatgtacctgatgggctgcttcgtcttcgtcttctta
gcactgctcgaatatgccttcgtcaattatatcttcttcggacgaggccctcagatgcag
aagaagatggcagagaaggcggagaaagccaacaacgaccgaaacaaatacgacggaaac
aagtctgttcaggagggagggaattgcaaagcgtcaggacttaaacagtccaatcaggta
caaggtcaccgtcactcacgaggggtggactctcaggggaacatcctgctgaccacgctg
gagatccataacgaagtggccggaaacgagatcaccaccagcgtcagcgatggcaggaac
tccacctcggtcatgttggataactcagggatccagtaccggaaggcgagcgggccgagg
aggcacagccaggagagaaacgctcagcccaaaaaggctcgactgcgcagacgctcttca
cagctgaaaatcaaaatcccagatctcacggacgtcaacgccatcgatcgatggtcacgg
ataatcttccctgccgtcttttccctttttaatctcatctactggctttactacgtcaat
taa
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