Silurus meridionalis (southern catfish): 124379652
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Entry
124379652 CDS
T08004
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124379652 (irx6a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
124379652 (irx6a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Adeno_L433K_22K
Motif
Other DBs
NCBI-GeneID:
124379652
NCBI-ProteinID:
XP_046696049
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Position
26:complement(8438799..8444198)
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AA seq
508 aa
AA seq
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MVTKDAAMSFSQFGYPYNATSQFFVSSKPSTTCCDSISRSVPDASSAPQAAASFCCPPAC
EKRLVSGARAELSAALGVYGSPYTPAHAYANYFQYGADSSTIYSTLNPQYDIKESTGSLH
GGISQPNAYYPYDHSLGQYQYDRYGTVDFNSSARRKNATRETTSTLKTWLYEHRKNPYPT
KGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAVDEKKEILEKMDQESIT
KDTQDGKEDRDLRLSDLDNIDDEDEDCDKLDSDCEKPSQDMALLSLPSLPIANPLKRDCS
SDLPSPSNFSAFPCKVKGIMALVPDLDTSGSKQQPQQLPALHPSPIGSISLPNFQVLDQK
PRIWSLARTAATEMTQHRQELQTECQAQAARVPLVVSSGNCAGSKGLQNPINLGNSENLF
EERAPSLNKVYSAANYRGLQLHCSSYQAVTDCYQYSNMEGFCSGGKSDTESSELSDMCLT
LQDAKTTAFRPVMKRLTEALPLSTGRFL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccaaagacgcagcgatgtctttctctcagtttggatatccttacaatgcaact
tctcagtttttcgtgtcgtcaaagcccagtacgacttgctgcgattcgatttccaggtcg
gtaccggacgcctcgagcgctccccaggccgccgcctccttctgctgcccgcccgcgtgc
gagaagcgcctggtgtcgggagcgcgcgcggagctgagtgcggcgctcggggtctacggc
tccccgtacactccggcacacgcttacgccaactacttccagtatggagcggattcctct
accatctactccacactgaatcctcagtacgatataaaggagagcactggaagccttcac
ggtgggatcagtcagcccaacgcttactacccatatgaccactcactgggccagtatcag
tatgacaggtatgggacggtcgactttaacagctcagccaggagaaagaacgccacacgt
gaaacaacaagcactctcaagacatggctttacgagcaccgcaaaaacccgtatccaacc
aagggtgagaagatcatgctggctatcattacaaagatgactctcacccaggtttccacc
tggtttgccaatgccaggaggagactgaaaaaggagaacaagatgacctggtcacccaag
aataaggctgttgatgagaaaaaagagatcctggagaagatggaccaggaatccatcacc
aaagacacacaagatggcaaggaggatcgggacctacgtctaagtgaccttgacaacata
gacgatgaggacgaggactgtgacaagctggacagtgattgtgagaaacccagccaagat
atggcattgctctctctgccctctctgcctatcgccaaccctctgaaaagagactgcagc
tctgaccttccttccccctccaacttctctgcgttcccctgcaaagtgaaaggtattatg
gcacttgttcctgacttggacacttcaggttccaaacaacaaccacaacagcttccggct
ttacatccttcacccattggttcgatttccttgcctaattttcaagttctggatcaaaag
ccaagaatttggtctctggccagaaccgctgctactgaaatgacccagcacagacaggaa
ttacaaactgaatgccaggcacaagctgctcgggtgccattggtggtaagcagtgggaac
tgtgcaggttccaagggtctccaaaaccccataaacttggggaactctgagaatttgttt
gaagaaagagcaccaagcctgaataaagtgtacagtgcagcaaactacagaggcctacaa
ctccactgttcctcataccaggctgtgacagactgctaccagtactccaatatggaaggg
ttctgcagtgggggaaagtcagacacagagtcttctgagctcagtgacatgtgtcttacg
ctgcaggatgccaagacaaccgctttcagacctgtgatgaagaggctaaccgaagcgctg
cccttgagcaccggcaggtttctgtaa
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