Silurus meridionalis (southern catfish): 124379677
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Entry
124379677 CDS
T08004
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124379677
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124379677
04090 CD molecules [BR:
smeo04090
]
124379677
04091 Lectins [BR:
smeo04091
]
124379677
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
SIGLEC family
124379677
CD molecules [BR:
smeo04090
]
Proteins
124379677
Lectins [BR:
smeo04091
]
I-type lectins (Siglecs)
124379677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
V-set
Ig_CD22
ig
I-set
Ig_5
Ig_4
DUF6529
SIT
MscL
Motif
Other DBs
NCBI-GeneID:
124379677
NCBI-ProteinID:
XP_046696104
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All DBs
Position
26:17747076..17752357
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AA seq
622 aa
AA seq
DB search
MTRKFTAAAAAAILMLLIGVQAQPSVTFSTQSLCAVTGSTVKIPCTFTKPDHSSVTQREW
YQVQSSEGEPQELSKDPQYSGRVYVSTWWSDCELTVRNVRLSDSGVYNFRFKTQSSKWIS
APSGVHLTVTDLQVKVDPNTEGQRKVKVTCSSTCSLSPYNLYWYKNGYYIKPTNENFIVL
DSTNVDDEGSYSCRVYESERRSPPVCVMRKACWRVTYTPDHVCALKGTSVDLSCSYTHPA
EHTVRTSVWFIKQKAEDDPVDVREDEEYQGRVQDTQNSQNNCSLRITNLRETDAQTYRFR
FYTDQDKYTGNPGVSLSVTDLKVTVSDWRNGYKMLSCITTCTLSNNPTYIWYKNGQRVPD
QNRNELDLDGSSDGSYSCAVTGHENLHSPAVYSPKNIRAEVLPTGDLMEGDLVTLSCSSD
ANPPVLTYSWFKQIAGADTLLSTGQNHSISNISSLHSGLYYCTAYNQLGHHNSTPVHLNV
LGSKNNTALKFSMVALVVFLAVTLVSGALWMWKRKSSSANKHSSTAESEQLQSAPVYDNI
PASNHRVTSDDQENITYTSVAFKHYHTEEGSLSPRLPPDTTDEEEVEYAAVNIQRNTAAT
QLDGANDDSSQIYSKVSRKSKI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgagaaaatttacagcagcagcagcagcagcaatcctcatgttactgataggagtt
caggctcagcccagtgtaactttctccactcagagtctctgtgctgttactggatctaca
gtaaaaatcccctgtacatttacaaaacctgatcactccagtgtcacacagagagagtgg
tatcaagtccagagctctgaaggagaaccacaagaactgagtaaagatccacaatattca
ggacgagtgtatgtgagcacatggtggtctgactgtgagctgacagtaagaaatgtgaga
ctgagtgactctggagtttataactttagatttaaaacacagagcagtaaatggatatca
gcgccatctggagttcatctgactgttacagatttgcaggtgaaggtggatcctaacact
gaaggacagagaaaagtaaaagtgacctgtagctccacctgcagtctcagtccatacaat
ttgtactggtacaagaatggctactacattaaacctacaaatgaaaacttcattgtcctt
gactcaactaatgtagatgatgaaggcagctactcctgtagggtgtatgaaagtgaacgt
cgctctcctccagtgtgtgtaatgaggaaggcgtgttggcgtgtgacttacactcctgat
catgtgtgtgctctgaaaggcacatcggttgatctctcctgctcttatacgcatcctgca
gaacacacagtgagaacatcagtgtggttcattaaacagaaggctgaagatgatcctgtg
gatgtgagagaagatgaggagtatcagggccgagtgcaggacacacagaactctcagaat
aactgtagtctgagaatcactaacctgagagagacagatgctcaaacatacagattcaga
ttctacactgatcaggacaaatacaccgggaatcctggagtctctctgtctgttacagat
ctgaaggttacagtatcagactggagaaatgggtataaaatgctgagctgcatcaccacc
tgcactctgtctaacaatcccacttacatctggtacaagaacggacagcgtgttcctgac
cagaacagaaatgaactggatctggatggcagcagtgatggcagctactcctgtgctgta
acaggacatgagaatcttcactctcctgcagtctattcacctaaaaacataagagcagag
gttcttccaactggagacctaatggagggggatttagtgactctgagctgtagcagtgat
gcaaaccctcctgttctcacctactcctggtttaagcagatagcaggtgcagacacactg
ctatcaacaggccagaatcacagcatcagcaacattagctctctgcacagtggactctac
tactgcactgcttacaaccagctgggacaccacaactctacacctgtacacctgaatgtg
ttaggttcaaagaacaacacagcgttaaagttcagcatggtggctctggttgtcttcctg
gcagtaacacttgtctcaggagctctgtggatgtggaaaagaaagtcaagctcggctaat
aagcacagcagcactgctgagagtgaacagcttcagtctgctccagtgtatgacaatatc
ccagcctcaaaccacagagtcacctcagatgatcaggagaacattacctatactagtgtt
gcttttaaacactaccacacagaggaagggtctctgtcacccagacttcctccagacact
acagatgaagaggaagtagagtacgctgctgtgaacattcaaaggaacactgctgccacc
cagctggatggagcgaatgatgattcatctcagatctacagcaaagtctccagaaaaagc
aagatctga
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