Silurus meridionalis (southern catfish): 124379689
Help
Entry
124379689 CDS
T08004
Symbol
nfatc3a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3 isoform X1
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04020
Calcium signaling pathway
smeo04148
Efferocytosis
smeo04218
Cellular senescence
smeo04310
Wnt signaling pathway
smeo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124379689 (nfatc3a)
04310 Wnt signaling pathway
124379689 (nfatc3a)
04020 Calcium signaling pathway
124379689 (nfatc3a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124379689 (nfatc3a)
09143 Cell growth and death
04218 Cellular senescence
124379689 (nfatc3a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
124379689 (nfatc3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124379689 (nfatc3a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
124379689 (nfatc3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
124379689
NCBI-ProteinID:
XP_046696126
LinkDB
All DBs
Position
26:complement(7915562..7996351)
Genome browser
AA seq
1043 aa
AA seq
DB search
MSSADCSGNEELDFRLIFGEDGQQPPPGPADLEPDDTTSFYILNVGQPPALVNQALGVQR
HGVQPHSQLISTSPTLHPLHKPFEPSYESPGSKYLPSEGGGGAGRPPKAFECPSIQITSI
SPSCQQELDGTEAHLRSKGVDGDFHERPLSRDHLYLPLDHSYRDSSLSPSPCSSLSSRSW
FSDASSCESMSHVYDDVDSELNEAAARFTLGSPLASPQGAPLEEHWQQHHHHHHPGYGPP
LSHPHTNSLSPRQSPCHSPRTSITDENWLSPRPPSRPSSRPTSPCGKRRHSSAEICYSGS
PHHSPTPTPGPSPRGSVTEDTWIGSPVGMPPFQCCTPDPDIPSKTRKTSQDCTATLQTGK
NDLSLDDSGNVSPLRDSPADESMHGLKKDGAGEQFLSVPSHFTWNKPKPGHTPIFRTSSL
PPLDWPLPSQYSQFELKIEVHPKAHHRAHYETEGSRGAVKAASGGHPVVKLMGYNEKPVN
LQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEIIIASTKVLEIPLLPENNMSASIDC
AGILKLRNSDIELRKGETDIGRKNTRVRVVFRVHIPQPNGKVLSLQAASIPVECSQRSAQ
ELPQVEKFNFSSCLVSGGEEMVITGSNFFPESKVIFLEKGPDGRPQWEVEAKIIREKSQG
SSMVVEIPPYHSKSITSAAQVQFYVCNGKRKRSQSQRFTYLSVLVKQEHRDDLDPSVSPM
PMSHAHAVGLVRSPVMPSPDNSHSQDGLLPGSPHGIAPSMHPLQTPCAPLHSPTFSHLPH
LQVRGLHPPPECQIPFHPGSVPPSRPTYPPLQHNLPFNGQASLPGASSHVYERVPFQPEQ
TGCHPLGMGMMYGSPVSAPVSVTSPSSPSHSLGYHCATPAQVTSPTHSLGQPGMQVQRSL
GYHPVEQRSASCPTPSNAPAQMIPLPHSGPSSPQLHSLPYQSPTSSSPTSSPLGAQPSPQ
ASSPVMTGIPAAGPMVHPLAPQQGPFTSEGERLNIKQEPEDKELTFRSIGLQDITLDDVN
EIIGRDMSQAPGVHGSASTLGHS
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgcagactgcagcgggaatgaggagctggacttcaggctgatcttcggtgag
gacggccagcagccgccgccaggccccgcagatctggagcctgatgacaccacttcgttc
tacatcctgaacgtgggtcagcctccggcattggttaaccaggccctaggtgtccagagg
catggagtccagcctcactcacagctcatctctacttcccctacattgcatcccctccac
aaaccctttgagcccagctatgagtccccaggttccaaataccttccaagtgaaggtgga
ggtggtgcaggtaggcccccaaaggcctttgaatgccctagcatccagatcacctccatc
tccccaagctgccagcaagagctcgatgggactgaggcacaccttaggtccaaaggcgtg
gatggtgacttccacgagcgaccgctgtctcgggaccacctgtatttgccactggatcac
tcgtaccgtgattcgtcattgagcccaagtccctgcagcagcttgtcatcacgcagctgg
ttctcagatgcttcatcgtgtgagtccatgtcgcatgtgtatgacgatgtggactcagag
ctgaacgaagcggcggcacgtttcacactcggatctcctctcgcttcacctcagggtgcc
ccactagaggagcactggcaacagcaccatcaccaccaccatccgggttacgggccacca
ctctcccacccacacaccaactctctctctccacgtcagtcaccatgccactccccacgc
accagcatcacagatgagaactggctcagtccacgtccaccttcacgtccatcctcgcgg
cctacatctccgtgtggtaaaaggcgccactccagtgccgaaatctgctactcgggttcg
ccccatcactctcccacaccaaccccgggcccttcgccgagaggcagcgtcacagaggac
acctggatcggaagtcctgtaggtatgccacccttccagtgctgcaccccagaccctgac
atcccttccaagaccaggaagacgtcacaggattgtaccgctacgctccagaccgggaaa
aatgacctcagcctggatgattcaggaaatgtctcacctcttcgtgattccccggctgac
gaatccatgcatggactgaaaaaagatggagctggggagcaattcctttccgtgccctct
catttcacttggaacaaacccaaaccagggcacacacctattttcaggacgtcctctctg
ccccccctggactggcccttgccgagtcagtacagtcagtttgaactgaagatcgaggtg
catccgaaagcccaccaccgggcacactatgagaccgagggcagccgaggagccgtcaaa
gcagcctccggcggacaccctgtcgtcaagctcatgggctacaacgagaaacctgtaaat
ctgcagatgttcatcgggactgcagacgaccgctatttgagaccgcatgctttctaccag
gttcaccgcatcacaggcaaaacagtggccacagcgagccaggaaatcataatcgctagc
accaaggttctggagattccactccttcctgagaacaacatgtctgccagtattgactgt
gctgggattctaaagttgaggaactccgatattgagctgagaaaaggcgaaacggacatc
gggcggaaaaatacccgagtgcgtgtggtgtttcgggttcatattccacaacccaatggg
aaagttctgtccttacaagctgcctcaatccctgtggaatgctcccagcgctcggcacag
gagttacctcaggtggagaagttcaatttcagcagctgtctggtcagtggaggagaggaa
atggtcatcacaggttcaaacttcttccctgagtcaaaggtcatcttcttggagaaagga
cccgatggacgaccacagtgggaagtagaagccaagatcattcgtgagaagagtcaagga
tcaagcatggtcgtggaaattccaccataccacagcaagagcatcacttcggcggcacag
gtgcagttctacgtgtgcaatgggaagcggaaaaggagccaatcacaacgattcacctac
ctgtcagtcttggtgaaacaggagcaccgagatgatttggacccctcagtgtcgccgatg
cccatgtcccatgcacatgctgttggcctggttcggtctccagtcatgccctctccagac
aactcacattcacaggatgggcttcttccaggctccccgcatggcatagcaccctccatg
caccctcttcagacaccttgcgcccctcttcactcacctaccttctctcatctgcctcac
ctgcaggtccgaggtcttcacccacctcctgaatgccagatacccttccatccaggcagc
gtgcctccctccaggccgacctacccccctcttcagcacaacctaccattcaacggccaa
gctagtctacctggagccagctctcatgtctatgagcgtgttcccttccaacctgagcaa
actggatgccatcctttgggaatgggtatgatgtatggctcaccagtttcagcccctgtc
tctgtaaccagtccttcaagccccagccactctctgggctatcactgtgccaccccagct
caggtgacctcgcctacgcactcccttggtcaacctggaatgcaggtccagcgttcgctt
ggctaccatccagtcgagcaacgttcggcttcatgcccaacgccctctaatgcccctgca
caaatgataccattgccccactcgggtccatcttctcctcagctgcactcactgccctac
cagtcacccacctcttcttctcccaccagcagccctctgggtgcccagccctcaccccag
gccagcagccccgtcatgacagggattcctgctgcaggacccatggtgcatccactggca
ccacagcaaggcccatttaccagcgaaggagagaggctaaacattaagcaggagccagag
gacaaagagctcacgttccgttctattggtctgcaggatattacactggatgatgttaat
gagatcatcggcagagacatgtctcaggctccaggggttcacggatccgcaagcacgctc
ggtcactcgtag
DBGET
integrated database retrieval system
