Silurus meridionalis (southern catfish): 124379843
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Entry
124379843 CDS
T08004
Symbol
psmc3
Name
(RefSeq) 26S proteasome regulatory subunit 6A
KO
K03065
26S proteasome regulatory subunit T5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124379843 (psmc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
smeo03051
]
124379843 (psmc3)
Proteasome [BR:
smeo03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
124379843 (psmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
RuvB_N
AAA_16
AAA_2
AAA_22
DUF815
DUF5827
Mg_chelatase
AAA_33
PhoH
IstB_IS21
AAA_7
AAA_24
CCDC22_CC
AAA_28
ATPase
NPHP3_N
Sigma54_activat
Golgin_A5
AAA_14
RNA_helicase
Parvo_NS1
AAA_11
Defensin
Motif
Other DBs
NCBI-GeneID:
124379843
NCBI-ProteinID:
XP_046696383
LinkDB
All DBs
Position
26:complement(603429..608380)
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AA seq
427 aa
AA seq
DB search
MASLNDRSVWDEVEDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDK
IKENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTY
FLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD
KQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA
GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE
LLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK
MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKK
ANLQYYA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttgaatgacagatcagtttgggatgaagtggaggatgggatcggtgaggaa
gtcctgaagatgtccactgaggagatcgtgcagcgaaccaggctgctggacagtgaaatt
aaaatcatgaagagcgaggtgctgagggtcacccatgagctccaggccatgaaggacaaa
atcaaagaaaacactgagaagatcaaagtgaataaaactctgccgtatctggtctcgaac
gttatagagctcctggacgtggaccctaacgatcaggaggaggacggagccaacatcgat
ctggactcgcagagaaaagggaaatgtgcagtcatcaaaacgtccacacgacagacgtat
ttcctgcctgtcattggtttggttgatgctgagaaactgaaacctggagatcttgtgggt
gttaataaggactcgtatctgattctggagactcttcccactgagtatgactctagagtg
aaggccatggaggtggatgagaggcccactgagcagtacagtgacatcggaggcctcgac
aagcagatccaggagttggttgaagcgattgtcttacccatgaaccataaggagaagttt
gagaatttgggtatccagcctccgaaaggtgttctgatgtacggaccacctggaactgga
aagacccttctggcccgagcttgtgctgcacaaactaaagcaacctttctgaagctagca
ggccctcagttggtgcagatgtttattggagatggtgcaaagctggtgcgcgatgctttt
gctctggcgaaagaaaaagcaccttcgatcattttcatcgacgagctggacgccatcgga
accaagcgcttcgacagcgagaaggctggagaccgtgaggtgcagaggaccatgctggag
cttctaaaccagctcgatggcttccagcccaacatgcaagtcaaggtgatcgctgctacg
aacagagtggacatcctggaccctgcgctgctgcgctcaggccggctggaccgtaagatc
gagttccccatgcccaacgaggaggctcgagctcgtataatgcagatccactcacgcaag
atgaacgtcagtcctgatgtgaattatgaggagctagctcgctgcactgatgacttcaac
ggtgctcagtgtaaagccgtctgtgtggaggccggtatgatcgctctgcgtcgtggggcc
accgagctgaaccatgaggactacatggagggtattctggaagttcaagccaagaaaaag
gccaacctccagtactatgcttaa
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