Silurus meridionalis (southern catfish): 124379872
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Entry
124379872 CDS
T08004
Symbol
adarb1a
Name
(RefSeq) double-stranded RNA-specific editase 1a
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124379872 (adarb1a)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124379872 (adarb1a)
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Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
124379872
NCBI-ProteinID:
XP_046696441
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Position
26:complement(19008484..19028740)
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AA seq
673 aa
AA seq
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MSSCGTDVKENRNLDNFLVKAAQQTANRNASLGSRRKRPLEEGNRGHAHSKFRPKRRKKA
PGPMLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFAMSVEVNGQRFEGMGPTKKKAKLN
VAEKALRSFVQFPNASEAHVAMGRTFSINTDFTSDQADFPDALFNGFETPHDLLRPISST
NGTLHPRSKCPAPVSAPQPVLVGHGKNAVMILNELRPGLRYEFVAESGESHAKNFVMAVT
VDSQAFQGSGRNKKLAKARAAQAALSGLFNMQLDQTPSRQPIPREGLQLHLPQVLADAVS
RLVVEKFSELTDNFISPHARRKVLAGVVMTTGTDVKDAQVICVSTGTKCINGEYMSDRGL
ALNDCHAEIIARRSLIRYLYSQLEYFLSNNPEDHESSIFRQCDLHGYQLKEGVQFHLYIS
TSPCGDARIFSPHEAAVEDQGDRHPNRKARGQLRTKIESGEGTIPVRSSNTIQTWDGVLQ
GERLLTMSCSDKISRWNVVGVQGSLMSYFSGPIYFSSIILGSLYHADHLSRAMYQRIADI
EELPQPFTLNRPLLSGISNAEARQPGKAPNFSVNWTVGDQGLEVINATTGKDDLGRPSHL
CKHTLYNRWVRLHTKLSQTLRIRATRPTSYHDAKQGAADYQSAKQTLIQTFQKLGLGAWV
KKPIEQDQFSLTP
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatgcggcacggatgttaaagaaaaccgcaatctggataattttctggtcaag
gcagcgcaacagacagccaatagaaatgcgtcgttggggtcgagacgcaagcggcccctg
gaggagggaaaccgaggccatgcccactccaaattccgtcccaaacggcgcaagaaagca
ccaggtccgatgttgccaaagaacgctctcatgcagctgaacgagatcaaaccgggcctc
cagtacaaactcctgtcccagacagggccggtacatgcgccggtcttcgccatgagcgtg
gaggttaacggccagcgctttgaagggatgggacccacaaagaagaaggctaagttaaat
gtggcagaaaaggctctgcgttctttcgtccagttccctaacgcttccgaagctcacgtg
gccatgggccgcacattcagcatcaacacagacttcacctcggaccaggcggatttccca
gacgctctgtttaacggatttgagacgccacacgatctgctccgccccatttccagcacc
aacggaaccctgcaccctcggagcaagtgccctgcgcctgtttcggcgcctcagcctgtc
cttgtgggccatggaaagaacgcagtgatgatcctgaacgagttgcggccgggccttagg
tacgagttcgtggcagagagcggagagagccacgcgaagaactttgtgatggctgtaacg
gtggactcgcaggcctttcagggatccggcaggaataagaaactggcaaaagcacgcgcc
gctcaggcagcactttcgggcctctttaacatgcagctagaccagacgccgtctagacaa
cccattcccagagagggtctgcagttacacctgccgcaggtcctggcagacgctgtgtct
aggctggtggtggaaaagttcagcgagctgacagacaacttcatatctcctcacgcacga
cggaaagtccttgctggtgttgttatgacaacagggactgatgtgaaggacgcacaggtg
atctgcgtttccacgggaaccaagtgcataaatggtgaatacatgagtgaccgaggcctg
gcgttaaacgactgtcacgccgagattatcgcacgccgctcgctaatcagatacctgtac
agccagctggagtacttcctcagtaataatccagaggatcatgagagctctatattccgg
cagtgtgacctgcacgggtaccagctgaaagaaggtgtacagttccacctgtacatcagc
acctcaccgtgtggagacgctcgcatcttctcaccacatgaagccgctgttgaggatcag
ggagacagacacccaaacagaaaagctcgagggcagctgcgaactaagatcgagtcaggt
gagggaaccattccggtccgctccagtaacaccatccagacgtgggatggagtcctgcag
ggggaaagactgctcaccatgtcctgcagtgataagatctccaggtggaatgtggtgggt
gttcagggttctctgatgagttatttctcaggccctatctatttctccagtataatcctg
ggcagtctgtatcatgcggatcatctcagcagggccatgtaccagcgcattgcagatata
gaggagttaccacagcccttcaccctcaacagaccactgctgagcggaatcagtaacgcg
gaggcgcgccagcccggaaaagctccaaacttcagtgtgaactggacggtgggggatcag
gggttggaagtcattaacgccaccacagggaaggatgaccttggccgaccttctcacctc
tgcaaacacaccctgtacaaccgctgggttcgactacacacaaaactctctcagactctg
aggatccgagcgactcgacccacttcatatcatgatgccaaacaaggtgctgcagattac
caatcagccaaacagactctgatccaaacattccagaaattgggccttggcgcttgggtg
aaaaaacccattgaacaggaccagttctccctcacaccatga
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