Silurus meridionalis (southern catfish): 124379885
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Entry
124379885 CDS
T08004
Symbol
trpm5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5 isoform X1
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124379885 (trpm5)
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124379885 (trpm5)
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
TPR_COPA_B
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
124379885
NCBI-ProteinID:
XP_046696463
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Position
26:complement(3861062..3877546)
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AA seq
1200 aa
AA seq
DB search
MSEPQGTPMVLMPTGKKCPNCGETVLEPDEEGNIIGCQCFSEDVETNEGSSHKAKEKRNK
AHWTAGRLGDIEFVGTNKTRGKFARVSSDTEPELLYQLLTEQWGLASPHLVVGLVGGDEQ
AQMKPWLRDTVRKGLVKAAQSTGAWILTSGLRFGITKHLGQAVRDHSLASTSSKVRVVAI
GIAPWTKIQNREMLLSTKPDQPASYPSEDLPHGAVYSLDCNHSHFILVEEDPKNPGATSN
MRVKLLKHISLQRTGHGGPGSFEIPVLCLLVHGEPRILQRMYKTIQNSTPWLILAGSGGV
ADILVTLINQACWNTDMIQELLIDTFPNGQSAAMASWIKLIMRILENLHLLTVHDPEQET
SALDTVILKALVKANKSQSQEAQDFLDELKLAVAWNRVDIAKSEIFNGDVEWTADDLEEV
MMDALVNDKPDFVRLFVDNGVNLSEFMTYGRLQDLYCTVREKSLLYELLLKKHNEKQVLL
SARSAGPAHIDMGDRRPRFTLLEVSKVLKDYLHDSCRGFYQKLPVERGGKGRLFHNQKDL
IDLEQHCEHPLRDLFLWAVLQNRQKMANYFWTLGAEAVAAALAGCKILKEMAHLESEAEN
ARSMKEAKYEQFALDLFTECYSNSEDRAYALLVRKTTCWNQTTVLNLATEADAKSFFAHD
GVQALLTKIWWGAMTTDTAISKLVLSFFCPPLIWTNLIKFSDEELENRVGGEQFAELDSL
ETEKALLLTDEDPADVEAAGDAAAQSCGAAWSQFLLRRWRRFWSAPVTVFLGNVIMYFAF
LVLFTYVLLLDFRPPPPNGPSPAEIILYFWVFTLVLEELRQSFFSDEDMSILKKFKLYVE
DNWNKCDMVAISLFVIGVSCRMVEGTYEAGRTVLALDFMVYTLRLIHIFAIHKQLGPKII
IVERMMKDVFFFLFFLSVWLIAYGVATQALLHPNDPRLDWVFRRVLYRPYLHIFGQIPLE
EIDAAKMPQDNCTMDLHMIIDGTLPPCPNIYANWLVILLLVIYLLVTNVLLLNLLIAMFS
YTFQLVQGNADIFWKFQRYNLIVEYHSRPALAPPFIIISHISELFLSLFGKAEENIEILE
RELSPGLDQKLMTWESVQKENYLAKLEKRRLESSEERLKSTSSKVQSLLISAARFKEQEK
RLAFMEAEVKYCGEVLSWMAECFKKSTLKCERDVPKSPRTKSSSEKAGNSSKKDDKDGQA
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagccccagggcactcctatggtgttaatgcctactgggaagaagtgtccaaac
tgtggagagacagtacttgaaccagatgaagaaggaaacattataggatgccagtgtttt
tctgaagatgttgaaactaatgaaggctccagccataaagctaaagagaagcggaataaa
gcccactggacagccggtcgtttgggggacattgaatttgtcgggaccaacaaaaccagg
ggcaagtttgccagggttagcagtgacacagagcctgagctactctaccagctgctgact
gagcagtggggccttgcttctccacacctggtggtggggctggtgggtggagatgaacag
gcccagatgaaaccctggctcagggacacagtgaggaaaggtttagtcaaagctgcacag
agtacaggagcatggatcctgaccagcggcttgcggtttggcatcacaaagcatctgggc
caagcagttagagatcactcattggccagtacttcttcaaaggtgcgtgtggtggccatt
ggaatcgctccctggaccaagattcaaaacagagaaatgctgctttctaccaagcccgat
cagccagcgtcctatccctcagaggatcttccccatggagctgtgtactctctggactgc
aaccactctcatttcatcttggtagaagaggacccaaagaatcctggtgctaccagcaac
atgcgtgtcaaattgctaaaacacatttccttacagcggactggacatggaggaccaggc
agctttgaaattcctgtcttgtgtctgcttgtccatggagaaccgagaatattacagagg
atgtacaagacaattcagaattcaactccatggctgattctggctggctcgggtggtgta
gcagacattttggttacactgatcaaccaggcttgttggaatactgacatgatccaagaa
cttctgattgacacatttcctaatggccaaagtgcagcaatggcttcctggatcaaatta
attatgagaattttggaaaatctccaccttttgacggtgcatgaccccgaacaggagact
tctgctctagacactgttatcctcaaagcactagttaaagccaataaaagtcagagtcag
gaggcacaggacttcttggatgagttgaaactggcagtggcctggaaccgagtagacatt
gcaaagagcgagattttcaacggagatgtagaatggactgccgatgatcttgaggaggtc
atgatggacgctttggtgaatgacaagcctgattttgttcgcctgttcgtggacaatgga
gtgaacttgtccgagtttatgacttacggccgtctccaggatctctactgcactgtgcgt
gaaaaaagcctgctgtacgaactccttctgaagaaacacaatgagaagcaggtgctgctc
tctgcccgatcggctggacctgctcacatagacatgggggatagacgacctcgctttact
ctgctcgaggtctccaaggtcctgaaggattatctgcatgattcctgcagggggttttac
cagaaactccccgtggagaggggaggcaagggtcggcttttccacaaccagaaagacctc
atcgacctggagcagcattgtgagcaccccttgagggacctcttcctttgggctgtcctg
cagaacagacaaaaaatggccaactacttctggaccttgggtgccgaggcagtggctgca
gctctcgctggctgtaaaatcctgaaagagatggctcatttggagtcggaggcagagaat
gcacggagcatgaaggaagccaaatatgagcagtttgctttagatttgttcacagagtgc
tactcaaacagtgaggaccgagcatatgctctcctggtaagaaagaccacctgctggaac
caaaccaccgtgctgaacctggccacagaggcagatgcaaagtccttttttgcccatgat
ggagtccaggcattgctgactaaaatctggtggggagccatgacaacagatacagcaatc
tctaaactggttttgtctttcttctgtccacctcttatatggaccaatctgataaaattc
agtgatgaggaattggagaatagggttggtggagagcaatttgcagagctggacagcttg
gaaactgagaaagccctgctactgactgatgaggacccagctgatgtggaggcagccggt
gatgctgcagctcagagctgcggtgcagcctggagccagttcctcctgcgacgttggagg
cgtttctggagcgcccctgtcactgtgttcctgggcaatgtcatcatgtacttcgccttt
ctagtgctcttcacctatgtgctgctgctggattttcgacctccgcctcccaacggccct
tctccggctgagatcattctttacttctgggtctttacgctagtgctggaggagctcaga
cagagtttcttttcggatgaagacatgagtatactgaagaagtttaagctctatgtagag
gacaactggaacaagtgtgacatggtagccatctctctcttcgtcattggggtttcatgc
aggatggtggaaggaacatatgaggctggacgcaccgtcctggctctggacttcatggtt
tatactttaaggctcatccacatctttgctatccacaagcagcttgggcccaagatcatc
atcgtggagagaatgatgaaggacgttttcttcttcctgttcttcctgagtgtgtggctg
attgcatatggagtagcaactcaggctctgctccacccaaacgacccccgactggactgg
gtgttccgcagagtgctctacagaccatacttgcacatattcggccagatacctctcgag
gagatcgatgcggctaaaatgccccaggataactgtaccatggatctgcacatgatcatt
gacggcactctacccccctgcccaaacatctatgcaaactggctggtcatcctgctgctg
gttatctatttacttgttactaacgttcttctgctcaatctgcttattgcaatgttcagc
tatacattccagctggtgcaggggaacgctgatatcttctggaaatttcagcggtataat
ctgattgtggagtaccacagccggcctgctcttgctccaccgttcatcattatcagccac
atctcagaactctttctgtccctgtttggaaaggctgaggaaaacattgagattctggag
agggagctgtcaccagggttggatcagaaactgatgacctgggagtcggtgcaaaaggaa
aattaccttgccaaactggagaaacgccgcctggagagcagtgaggaaagactcaagagc
acatcctccaaggtacaaagcttgctgataagtgcggcacggtttaaagagcaagaaaaa
cgtttggcctttatggaggcagaggtgaaatattgtggagaggtgctctcttggatggca
gaatgcttcaaaaagagtacattaaagtgcgaaagagatgttcccaaaagcccacgcacc
aagtcgagcagtgaaaaggctggaaattcttcaaagaaagatgataaggatggacaagct
tga
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