Silurus meridionalis (southern catfish): 124379887
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Entry
124379887 CDS
T08004
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124379887 (sox21b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124379887 (sox21b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124379887
NCBI-ProteinID:
XP_046696469
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All DBs
Position
3:31419782..31423615
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AA seq
240 aa
AA seq
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MSKSSDHVKRPMNAFMVWSRAQRRQMAQENPKMHNSEISKRLGAEWKLLTDSEKRPFIDE
AKRLRALHMKEHPDYKYRPRRKPKTLAKKEKFALALPYAVHADSESMKPSPDSLLRSSDR
ARILFAPSICANPYSFLDFGSKMADFSPPPPPPPPLPPAMPSFPYPSSLGFPPFSGVHAH
TSAHNPAFLMPCSCSAWPSSSSSSSSSSSSSSFSTPLAYILLPGVGKAPVEPYHAYAAAL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtcttcggaccacgtgaaacgccccatgaacgccttcatggtgtggtctcgg
gcccagcgccggcagatggcacaagagaacccaaagatgcacaactccgagatcagtaag
cgtctcggcgcagagtggaaattgctgaccgactcggagaagcgtccgtttatcgacgag
gccaagcgactccgcgcactgcacatgaaggagcatcccgactacaaataccggcctcga
cgcaaaccaaagaccctcgccaagaaagagaagttcgccctggcgctaccgtacgccgtt
cacgccgacagcgaatcgatgaaaccgtcccccgactcgctgctgcgctcctccgacaga
gccaggatcctgttcgcaccctccatctgcgccaacccctactcctttctggattttgga
tccaagatggccgacttctctccacctccacctccgccgcctcctcttcccccggccatg
ccgtccttcccgtacccgtcctcactgggtttcccgcctttttcaggcgtccatgcgcac
acgagcgcacacaatccggccttcctgatgccgtgcagctgcagcgcctggccttcgtcc
tcgtcgtcgtcgtcttcgtcatcgtcgtcatcgtcgttttcaacaccgttagcgtacatc
ctgctgccaggcgtcgggaaagcaccagtagagccgtatcacgcctacgctgctgcgctt
tga
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