Silurus meridionalis (southern catfish): 124379896
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Entry
124379896 CDS
T08004
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04110
Cell cycle
smeo04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124379896 (smc3)
04114 Oocyte meiosis
124379896 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124379896 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
smeo00535
]
124379896 (smc3)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124379896 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
124379896 (smc3)
Proteoglycans [BR:
smeo00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
124379896 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
OmpH
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
124379896
NCBI-ProteinID:
XP_046696478
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All DBs
Position
26:18002564..18018292
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKARISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNTVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIATINKDL
EDTEANKEKNLEQYSKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSQNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELTELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRIKDTMARSEDLDTLIDKTEVEIKDHIKS
MERWKNIEKEQNEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGGQSQDEGEGGADSERG
SASQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ISAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggtgatcatacagggcttccgcagttacagagaccagactgtggtg
gaccctttcagttcgaagcacaatgtgatcgtgggcagaaacggatccggaaagagcaac
ttcttttacgcgatccagtttgtgctgagcgatgagttcagtcacctgcggcccgagcag
cgtctggccctgctgcatgagggaactggtccccgagtcatctctgcttttgtggaaatt
atattcgacaactctgacaacaggcttccgattgataaagaggaggtctcactgcggcgt
gtcatcggagctaagaaggaccagtacttcctcgataagaagatggtgacgaagaacgat
gtgatgaacttgttggagagcgcgggtttctcccgcagtaacccgtactacattgtaaag
cagggaaagatcaaccagatggccacggcacccgattcgcagcgtctgaagctcctgagg
gaggtggcgggaacccgggtgtacgacgagcgcaaggaggagagcatctctctgatgaag
gagacagagggaaagagggagaagatcaacgagctgctgaagtacatagaggagcgactg
cacacgctggaggacgaaaaagaggaactggcgcagtaccagaaatgggacaagatgagg
agagctttggagtacaccatctacaaccaagagctcaacgagactcgggccaaactcgat
gagctgtcttctaagagagagacgtgtggagacaaatcgaggcagttacgtgacgctcag
caggatgccagagacaaagtggaggagacggagcgagtcgtgcgcgagctaaaggctcgt
atctctgccatgaaggaggagaaggagcagctgagcgccgagcggcaggagcagatcaag
cagagaaccaaactggagctcaaagccaaagacctgcaggacgaactggcaggcaacagc
gaacagaggaaacgattactgaaagagaggcagaagctgttggagaagatcgaggagaaa
cagaaggagttgcaggagacagagcccaaattcaatacagtaaaggagaaagaggagagg
ggcattgccagactggcccaggccacgcaggagcgcacagacctgtacgccaagcagggg
cgtggcagccagttcacctccaaggaagagagagacaaatggatcaaaaaggagctgaag
tccctcgaccaggccattaacgacaagaaacgtcaaatcgccaccataaacaaagacctg
gaggacaccgaggccaacaaggagaagaacctggagcagtacagtaaactggaccaagat
ctgaacgaagtgaaaacccgcgtggaagagctggacaagaaatactacgaggtgaagaac
aggaaggacgagctgcagagcgagagaaactacctgtggagagaggagaatgcagagcag
caggccctggcagccaagagagaagaccttgagaaaaaacagcagttactccgtgcagca
acaggaaaggccatcctgaacggcatcgacagcattaacaaggttctggaacatttccgt
cggaaaggcatcaaccagcatgtaataaacggataccacggcatcgtcatgaacaatttt
gagtgcgagcccgccttctacacctgtgtggaggtgactgctggaaccaggttgttctat
catatcgtcgagactgacgaggtcagcacgaaaattttgatggagttcaataagatgaac
ctgcctggagaggtcaccttcctgcccctcagcaagctggacgtccgcgacaccgcctac
cccgagaccaacgatgccatcccgatgatcagcaaattacgctacagccagaactttgat
aaagcctttaagcatgtgtttgggaagaccctcatctgtcgcagtatggaggtctccacg
cagctggctcgagccttcactatggactgcattaccttggagggagaccaggtgagtcac
cgtggcgctctcaccggtgggtactatgacacaaggaagtcacgcctggagcttcagaag
gacatgcgcaaagccgaggaggagctcaccgagctcgaggccaaactcaatgagaacctg
cgcaggaacatcgaacgcatcaataacgagatcgaccagctgatgaaccagatgcagcag
atcgagacgcagcagaggaagttcaaggcctcacgcgacagcatcctctccgagatgaag
atgctgaaggagaaaaggcagcagtctgagaaaaccttcatgccaaagcaacgcagtctg
cagagtctggaggcaagtctgcacgccatggagagcacccgggagtccctaaaggccgag
ctcggcaccgacctgctctctcagctcagcctggaggatcagcggcgcgtcgacgacctc
aacgacgagatcagacagctgcagcaggacaacagacagcttctgaacgagcgaattaaa
ctggagggcattatgaccagggtggagacgtacctgaacgagaacctgcgcaaacgcctc
gaccaggtggaacaggagctgaacgagttgagagagacagaaggggggacggtcctcacc
gccacgacgtccgagttggacggcatcaacaaacgtatcaaagacactatggcccggtcc
gaggacctggacacgctgatcgataagaccgaagtggagattaaggaccacataaaaagc
atggagcgctggaagaacattgagaaagagcagaacgaggccatcaaccacgacaccaag
gagctggagaagatgaccaaccggcagggcatgctgctgaagaagaaggaggagtgcatg
aagaagatccgtgagctcggctcccttccgcaggaggctttcgagaagtaccagacgctc
acgcttaagcagctcttccgcaaactggagcagtgcaacaccgagctgaagaagtacagc
cacgtgaataagaaggccctggaccagtttgtgaacttctccgagcagaaggagaagctg
ataaagaggcaggacgagctggacagaggctacaagtccatcatggagctcatgaacgtc
ctggagctgcgtaaatacgaggccatccagctcacttttaaacaggtgtctaaaaacttc
agtgaggtcttccagaagttagttccaggaggcaaagcaacactcgtgatgaagaaagga
gatgctgaaggggggcagtctcaggatgaaggggagggtggagctgacagcgagagaggc
tccgcctcccagagcagcgttcccagtgtggaccaattcacaggagttggaatccgagtg
tccttcacaggtaagcagggcgagatgagggagatgcagcagctctccggagggcagaag
tccctggtggcacttgcactcatctttgctatccagaagtgcgaccccgcccccttctat
ctattcgatgagatcgatcaggctttggatgcgcagcacaggaaagccgtctcagacatg
attgtggagttggcgggacacgctcagttcatcaccaccaccttcagacccgagctgctg
gagtcggccgacaagttctacggagtcaagttcagaaacaaggtgagtcacattgacgtg
atctctgccgagcaggccaaggacttcgtggaagacgacaccactcacggttaa
DBGET
integrated database retrieval system
