Silurus meridionalis (southern catfish): 124379906
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Entry
124379906 CDS
T08004
Symbol
pop4
Name
(RefSeq) ribonuclease P protein subunit p29
KO
K03538
ribonuclease P protein subunit POP4 [EC:
3.1.26.5
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124379906 (pop4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124379906 (pop4)
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124379906 (pop4)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124379906 (pop4)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
124379906 (pop4)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
124379906 (pop4)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
124379906 (pop4)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
124379906 (pop4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P-MRP_p29
OrfA
Motif
Other DBs
NCBI-GeneID:
124379906
NCBI-ProteinID:
XP_046696495
LinkDB
All DBs
Position
26:complement(13790401..13792869)
Genome browser
AA seq
220 aa
AA seq
DB search
MEKVVLSRLPPDESKLLGVQSEHGSAAEKFTMAFLKSSTPRLSTEKAEEALQHKALMLQY
ARERKRRGKKTKAKGLNAKDIRTMRVFELKPEHQKYDLFLPLHELWKQYITELCNGLRPD
SNLQVMQQKLLKADFHGAIITVVRSKCPSYVGSTGILVQELKHIFKIITQENRLKIIPKK
NSVFSVEMGDFVTYIYGSKFELRSSERSAKKFKTKGTIDL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggtggtgttgtctagacttcctcctgatgaaagcaaactgctgggagttcag
tctgagcatggatctgctgctgagaagttcaccatggccttcctgaagagcagcacacct
cgcctgagcactgagaaagcagaagaagcgctgcagcataaagcgctgatgctgcagtat
gctcgggagaggaagagaagagggaaaaaaacaaaggctaaaggactgaatgctaaagac
atcagaaccatgagagtgtttgagctgaaacccgagcatcaaaagtacgatctcttcctg
ccactgcatgagctgtggaagcagtacatcactgagctgtgtaatggcctcagaccagac
agtaatctacaggtgatgcagcagaaacttctaaaggcagattttcatggtgctattata
acagttgttcgctctaaatgcccctcatatgtgggctccacagggatcctggtgcaggag
ctgaaacatatatttaagatcatcacacaggagaaccgactgaaaatcattcctaagaag
aacagcgtgttcagtgtggagatgggagactttgtcacgtacatttacggcagtaagttt
gagcttcgctccagtgagaggtcggccaaaaaattcaagaccaaaggcaccatcgacctg
tga
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