Silurus meridionalis (southern catfish): 124379936
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Entry
124379936 CDS
T08004
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04217
Necroptosis
smeo04622
RIG-I-like receptor signaling pathway
smeo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124379936 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
124379936 (cylda)
04625 C-type lectin receptor signaling pathway
124379936 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124379936 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124379936 (cylda)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124379936 (cylda)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C67
124379936 (cylda)
Ubiquitin system [BR:
smeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124379936 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
124379936
NCBI-ProteinID:
XP_046696533
LinkDB
All DBs
Position
26:complement(9925164..9956253)
Genome browser
AA seq
965 aa
AA seq
DB search
MSSVLWSQEKGAGSPRDDWRFFMLLKECVVEKAAQKVVRVQRGSLGQVCPERNSLGRPLP
PAKGKRSLRILDQSNVVASVDERDALELDEALAELLFPITNCEERYGLLCDTARLQRARA
IRCGSRVRVQLRSGDPPLPGVVRFKGALLPDRALSGIWFGVELLEEGRGQGFTEGSYQGQ
QLFRCEDECGVFVALDKLELWEDEELEVDHLSLVDNEPDVEGDFPPLDLNSRVLVQIHEG
PERGTVIFCDLLPGNETLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDVM
PEYSMQDPRLSKTSFTPRGSSEKSGSQSKPKSKALGLQAASRSKSEFYYTLNGSSVDHPS
QSKSKSTWYIDEVGEDPAKSLTETPPDFNQASPPPRAPPTAPSLSSDNKFHSLPFSLSRK
SGPNGSMSHGPLSLSVQSVMGEQQEAPPPPTAPSPRPPSPPKGQPGLEVGSLVEVKENPP
LCGVIRWVGLPPGLQEPLAGLELEEECVGCTDGTFKGTRYFTCPPKKALFVKLKCCRPDS
RFPSQHHSPNPIERCNSIAFGGYLSEVVNENTPPRTESDGLDVMIGKKKGIQGHYNSCYL
DSTLFCLFSFSSVLDTVLLRPKSKTDVEYYLETQELLRTEIVNPLRIHGYVCATKIMKLR
RILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRRSGRNTVADLHISAGQKVQD
CYFYQIFMDKKDKVLVPTSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMYNKIFP
SLELDITDLLEDTPRECRICGGLALYECRECYEDSDITAGKIKQFCEKCNTQVHLHPRRK
SHRYSKLSLPKELQEGSWRQAAFPRQQMELFAVLCIETSHYVAFVKYGSAPTSWLFFDSM
ADRDGGQNGFNIPQVSPCPEVGAYLKMTPEELHALDPKNIQGYARRLLCDAYMCMYQSPT
MSLYK
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggtgctatggagtcaggagaagggggcgggcagcccgcgggacgactggcgc
ttcttcatgctgctgaaggagtgcgtggtggagaaggcggcacagaaggtggtgcgtgtc
caacgtggaagtctgggtcaagtctgccccgagcgcaacagcctgggccgcccgctgccc
cccgccaagggcaagcgcagcctgagaattctggatcagagcaacgtggtggcgagcgta
gacgagcgtgatgcactggagctggacgaggccctggccgagctgctcttccccatcacc
aactgcgaggagcgctacgggctgctgtgtgacacggcacgtctccaacgggctcgcgcc
atccgctgcggctccagggtgcgagtgcagctacgctccggcgacccgccgttacccggc
gtcgtcagattcaaaggagctctgctgcctgaccgcgctctctccgggatctggttcggt
gtcgagctgctggaggagggtcgcggtcagggttttactgagggctcgtatcagggccaa
cagctgttccgctgtgaggacgaatgcggcgtattcgtcgctctcgacaaactggagctc
tgggaggacgaggaactggaagtagatcacctgagtctggtggacaacgagcccgatgtg
gaaggagatttccctcctttggacctaaactctcgcgtcctggtgcaaatacacgagggc
cctgaacgtggcacggtcatcttctgcgaccttttacccggcaatgagactctcggctat
tacgtcggtgtcgatatggacaatcccatcggtgactgggacggcgtgatcgacgggaaa
ctgctgtgtaactttgccagcctcgagcacacccgtctcgtgcccatctgtgatgtcatg
ccagagtactccatgcaggacccgaggctgtccaaaaccagcttcactcccagagggagc
agtgagaagtctggcagtcagagcaaaccaaagagcaaagcgttaggtctgcaagctgcc
agcagaagcaagtccgagttttattatacattaaacggcagctctgtcgatcacccgagc
cagtccaaatccaaaagcacgtggtacatagacgaagtgggtgaagacccagcaaagtcc
ttgaccgaaacgcctcccgacttcaaccaggcctcgccaccaccccgagctccacccacc
gccccctcgctgtccagtgacaacaagttccactcactgcccttcagcctgagtcgcaag
agcggccccaatgggagcatgagccatgggccgctctcgctgtccgtccaatcagtaatg
ggagaacagcaggaggctccgcccccaccgacagctccctctccaaggccaccatcaccc
cctaaaggtcagccagggttagaggtcgggtcactggtagaggtgaaggagaatccaccc
ctatgtggggtgatacgctgggtgggtctgccccctggactacaggagcctcttgcaggg
ctggagctggaagaggagtgtgtaggatgcactgatggtacttttaaaggcacacgctac
tttacctgtcctccaaagaaagctttgtttgtgaaactgaaatgctgccgaccagattct
cgtttcccctcacaacaccactctcctaatccaatcgaacgctgcaattctatagcattt
ggaggttacctgagcgaggtggtaaatgagaacactcctcctcgtacagagagtgatggc
ctggatgtgatgatcgggaagaaaaaaggcattcagggccactataactcctgttacttg
gattcaacactcttctgtctgttctcgtttagctcagtgttggacacagtgttactgagg
ccgaagtctaagactgatgtggaatattacctggagacacaggagctgttacgcactgag
atagtcaacccactgcggattcatggttatgtctgcgcaactaagatcatgaaattgcgg
agaattctagagaaagtggaagctgcatcaggattcacgtctgaggagaaagatcctgaa
gagtttctcaatatcctgtttcaccacatcctgagggtcgaccctctgcttaaactacgg
agatcaggcagaaatactgtagcagatttgcatatttctgctggccagaaagtccaggac
tgttacttctaccagatcttcatggataaaaaggataaagtgcttgtgccgaccagccaa
caactgctggagtggtccttcatcaatagtgacctcaagtttgctgaggctccttcgtgc
ctcattatccagatgcctcgctttgggaaggactttaagatgtataataagattttcccg
tctctggagctggacatcacagatcttctggaagacacccccagagagtgccgcatctgt
ggtgggttagctctgtacgagtgcagggagtgttacgaggattctgacatcacagcggga
aagattaagcagttctgcgaaaagtgcaatacacaggtgcatctgcatccacggcgtaag
agtcaccgctacagtaaactctcgctacctaaagagcttcaggagggctcatggagacaa
gctgcattccctcggcagcagatggagctgttcgccgtgctctgcatcgagaccagccac
tatgtggctttcgttaaatacggctcagctccaacctcctggctcttcttcgacagcatg
gccgaccgagatggtggccagaacggttttaacatcccgcaggtgtccccgtgtcctgaa
gttggagcgtacctgaaaatgacccctgaagagcttcacgccctcgaccctaaaaacatc
cagggctacgcacggcgcctgctctgcgacgcttacatgtgcatgtaccagagccccacc
atgagcctgtataaatag
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