Silurus meridionalis (southern catfish): 124379941
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Entry
124379941 CDS
T08004
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124379941
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
124379941
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
Ig_2
CarbopepD_reg_2
ig
CarboxypepD_reg
TSP_1
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
124379941
NCBI-ProteinID:
XP_046696543
LinkDB
All DBs
Position
26:complement(10943579..10952939)
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AA seq
1153 aa
AA seq
DB search
MAYKLAGVFLLLLFGISVTFTQDDHEWTTWFNVDHPGGKGDYEQLDAIRFYYNARVCDSP
LALEARTTDWIPAHKTQEKVHTEPTVGFWCVNSEQPEGKNCSNYAVRFLCPRETKLETEG
VWGQWSDWTPCPAQCGQVATQIRSRTCTTQSRQCSGVKLESRHCKGPTCPGCSLQCVMGR
VNTDCNACMCKNHIVLGSVRRAGSLQAPGAAILLAGTSPKLLTLSDHNGHFRIPGICPDG
NTTLLIKLQGHMPHQIVMPLTSEPTTVLHVMLERAKNLYVQKNPESKARRMGQTAAFCCK
VTGSPEPDEYQWFHNGTLLEKSVYHYGDTLVLRNLRMDQAGEYYCRASSENGAIKSKPAT
LSIIGQTEPSCNPKPEPHMILLPHDCFQNQTNSLYYDVGRCPIETCTGQLDNGIRCKDST
SFCCGVSKMEKRPITCQGYQLPMMVVTECGCKKCVETKTIVRGRAFASDTGEPLRFGHIY
MDGARISRTGYKGTFSIQVPTDTERLVLTFVDSMQKFVNTTKVLVFNNKGGAVYHEIKLL
RKKPPVILSSTDTNNLQLGEVQGEEPMVEIEIPPNSFYKQNGEVFVGNVKASVTFMDPRD
VSTAEAAQSDLNFISTEGDTLPLRTYGMFSVDFRNEIDGESLNAGKVNVRLDAAQVKMPE
HLNTMKLWSLNPDTGLWEEEGQLLMEKKQRQKREERTFLIGNMEIRERRLFNLDVPENRR
CYVKVRAFRSERFMPSEQVEGVVVSLINMEPTAGFSSNPRAWGRFDSVITGTNGACLPAF
CDDKKADAYSAYVMANLGGEELDAVASAPKLNPNSIGVPQPILSKLNYRRTDHDDPRIKK
TAFSINVAKPSPNTAEEANGPIYPFEKLKECEEAPFNAPHFRFSRVEGDRYDYNTVPFNE
DDPMSWTEDYLSWWPKPTEYRACYIKVKINSLHETNVRSRNMGGTHPRTVGQLYGLRDTR
SIRDRDQTSVSAVCLEFKCSGMLYDQDRVDRTLVKVIPQGSCKRDSVNSMLQEYLVNHLP
LAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFEGTSDGASRVMKSNE
GVALIFSCGDKEVTRQSVFQQLQNAPGRVTAGSARTGRGSRRQRGDSSAALRNSRRRSTR
NPNGRSLTPRQSS
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacaagctagccggagtctttcttcttctcctcttcggaatttctgtcaccttc
actcaagatgaccacgagtggaccacttggttcaatgtcgatcacccgggagggaagggg
gattatgagcaactggatgcgattcgtttctattacaacgctcgagtgtgtgattcccca
ctggcgctggaagcccgcacgacagactggatcccagctcacaaaacacaagagaaagtg
catacagaacccaccgttggcttctggtgcgtcaattcagaacagcctgaaggaaagaac
tgctctaattatgcagttcgtttcctttgcccaagagaaacaaagctggaaactgaagga
gtatggggtcagtggtcagactggaccccttgtcctgcccaatgtggccaggtcgcaacc
cagatacgttccagaacctgcacaacccaatccaggcagtgcagtggtgtgaagctggaa
agcaggcactgcaaaggacctacgtgtccaggttgtagtctgcagtgtgtaatgggcagg
gtgaacacagactgcaatgcatgcatgtgtaagaaccatatagtgcttgggtcagttcgt
agagctggaagtcttcaagctcctggagcagccattctccttgcagggacaagccccaaa
cttctcacactatctgaccacaatggacacttccgcatacctgggatttgcccagatgga
aacactacactgctgattaagctgcagggtcacatgccccatcaaattgttatgccactt
acctctgagcccacaactgttcttcatgtgatgctggagagagcaaaaaatctatatgtg
caaaagaaccccgagtcaaaagcaaggagaatgggtcagactgctgccttctgctgcaag
gttactggttcacctgaacctgatgagtatcagtggtttcacaatggaactttgctcgag
aagagtgtatatcactatggcgatacactggttctgaggaacctaagaatggatcaggca
ggagagtactactgcagagccagcagtgagaatggtgctattaaatccaagccagccaca
ctctcaatcataggtcaaactgagccttcgtgcaacccgaagcctgaaccccacatgatc
cttctaccacatgactgcttccagaaccagacaaactcattgtactatgatgtaggaaga
tgccccattgaaacatgcactggccagctggacaacggtattcggtgcaaagactccaca
tcgttttgctgtggggtgtccaaaatggaaaagagaccgataacatgccaaggctaccag
ctgcccatgatggtggtcacagagtgtggctgcaaaaaatgtgtagaaacaaagacaata
gtccgtggacgtgcttttgcatcggatacaggagagcccttgaggtttggacatatttac
atggatggcgcaaggattagcagaacaggatacaagggcactttctccatacaagttccc
acagatactgaaaggcttgttcttacttttgtagacagcatgcaaaagtttgtgaacact
actaaagtacttgtgttcaataacaaaggtggagctgtgtaccacgagatcaaactgctg
aggaaaaagcctcctgttatcttaagctcaaccgacaccaacaatctacagcttggagaa
gtacaaggagaggaacctatggttgagattgaaattccaccaaactctttctacaagcag
aatggcgaagtattcgtaggtaatgtgaaagccagcgtcaccttcatggacccaagagat
gtatccacagcagaggccgctcaaagtgatctcaactttataagcactgaaggtgatacc
ctccccttgagaacctatggtatgttctcagttgacttcaggaatgaaatagatggtgag
tcactaaatgctggtaaagtaaatgttcgtctcgatgcagcccaagtaaagatgccggaa
catctaaatacaatgaaattgtggtccctcaacccagacactggtctttgggaagaggaa
ggacagcttcttatggagaaaaagcaacgacaaaaacgagaagaaaggacttttctcata
ggaaacatggaaatccgggaaagaaggttgtttaacttagacgtgcctgaaaacagaaga
tgctacgtcaaagtcagagcgttccgtagtgaaagatttatgccaagtgagcaagttgag
ggtgttgtggtaagtctgataaatatggagcctacagctggtttttccagcaaccctcgt
gcatggggtaggtttgatagtgtcatcactggtaccaatggtgcatgtctgcctgccttc
tgcgatgacaaaaaagcagatgcttattctgcttatgtcatggcaaaccttggaggagaa
gaacttgatgcagtagcatcagcaccaaaattaaatcccaacagcattggtgtccctcaa
cccattttgagcaagctgaactacagaagaacagatcacgatgatcctagaatcaagaag
acggcatttagtatcaacgtagcgaaacctagcccaaacacagccgaagaagcaaatggt
ccaatttatccatttgaaaaactaaaggagtgtgaagaagctccatttaatgcacctcac
ttccgcttttcgagagtcgaaggagatcgatatgactacaacacggttcctttcaacgag
gatgatccgatgagttggactgaagactacctgagctggtggccgaagccgacagaatac
agagcttgttatattaaagtaaaaatcaacagcctgcatgaaaccaatgtccgttctcgc
aacatgggaggcacccatccaagaacagtgggccaactatatggacttcgcgacacccgt
agtatccgagaccgggatcagaccagtgtctcagcagtctgtttggagttcaaatgcagt
ggcatgctctacgaccaagacagagtagatcgaaccctagtgaaggtgatcccgcagggt
agttgcaagcgagacagtgtcaacagcatgcttcaagaatacctggtcaaccatctacca
ctggctgtcaacaatgacaccaatgagttcactatgcttgcaccactagaccctttgggc
cataattatggcatctacacagttactgatcaagatcctcgcacagcgaaggaaatagca
cttggacggtgtttcgagggtacatcggacggggcatcacgagtaatgaaaagtaatgaa
ggtgtggcattaatcttttcttgcggtgacaaagaggtcaccaggcaaagcgttttccag
cagctccagaatgctccaggccgggtcacggcagggtctgcccgtacagggagaggcagt
cgaaggcagcgaggagactcctcagccgcactccgcaacagccggagaagaagtacccgc
aatcccaacgggcgctccctgactccacgccaaagttcataa
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