Silurus meridionalis (southern catfish): 124380014
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Entry
124380014 CDS
T08004
Symbol
lrrfip1b
Name
(RefSeq) leucine-rich repeat flightless-interacting protein 2 isoform X1
KO
K26434
leucine-rich repeat flightless-interacting protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124380014 (lrrfip1b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Other transcription factors
LRRFIP
124380014 (lrrfip1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRRFIP
CCDC-167
DUF6026
DUF6694
DUF3322
Motif
Other DBs
NCBI-GeneID:
124380014
NCBI-ProteinID:
XP_046696678
LinkDB
All DBs
Position
1:complement(7505146..7556216)
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AA seq
657 aa
AA seq
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MGTQVTGRKRIPNREKVSAEDDALSQIAREAEARLAAKRAARAEAREIRLKELERQQKEI
YQAQRKYHGHGLDSKWGHIEQWMEDSERYSRHSRRHTSISDDEERMSVGSRGSLRPTDYG
GFLGSGSRASSRASSARASPVVEERSDFLEKGSRTASTLSAATLASLGGGFSRRGSCDTS
ISVDTEASIREMKDSLAEAEEKYRKAMVSNAQLDNEKSNLMYQVDTLRDTLMELEELLYE
TRRECEEKTKEYDRERHAHNILQFQFNEMKETLKQSEELLKEAQQLRSKRESYVSEISDL
QETLEWKEKKIAALERQKEYSDIIQDERDALRNEVFRLRDALKKHGISLGSEVTTNGETG
NNMTNGPECVESAQDGPAMSADSILERSPEDQAPKMDSTSCMEVAYSEVKRTEDMDSSAR
ASCSFVQIQEYYRIPKTIEYYRGQSVCAENVPDEIIHDSVVAQNNVMLKAEKNANKQNEQ
KEEPWVEENTSVTEDPESLLSRGTNEELAPSQFIKANNQYKPTNRTGEETAEKMDLPRPT
KSYQDPRKAIPSTNVAMTSYGKGYLSSSSEQEFETELKFESGAVKSCFFTIPVEEKGIAS
FLDSCQEALPLEFEVVRHEESDMARAAQQGETNSAVDDRKHNSTRLKTMSKQDCIVS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggaactcaggtgactgggaggaaaaggatcccgaatcgggagaaagtatcggcggag
gatgatgctcttagccagattgctcgagaggcagaggcgagactggcagcgaagcgggca
gcccgggcagaagctcgagagatccgcttaaaggagctggagaggcagcagaaagagatt
tatcaagctcaaaggaaataccatgggcatgggctggacagcaaatggggccatattgag
cagtggatggaggacagcgagcgttactcgcgccactcacggagacacacatcgatctcg
gatgacgaggagcggatgtctgttggaagtaggggcagtttgaggcctacagactatggg
ggatttttgggctccggttccagggcctcgtcacgggccagttcagctcgtgccagccct
gtggtggaagagagatctgacttcttggaaaagggatcaaggacagcatctactctctct
gctgccactttggcctcactaggtgggggcttttctcggagaggcagctgtgacacttcc
atatcggtcgacacagaggcctccatacgagagatgaaggactctctggctgaggctgaa
gagaagtatcgaaaggccatggtgtccaatgctcagctagataatgagaagtccaacctg
atgtaccaagtagacacactgcgagacacactgatggagctggaagagctgctttatgag
acacgcagggagtgtgaagagaaaacaaaggagtacgatcgggagcgccatgctcacaac
atcctgcagttccagtttaatgagatgaaggagacgttaaaacagagtgaggaactattg
aaggaagcacaacaattgcgctcaaagcgggagagctatgttagcgagatctctgatcta
caggaaacattggaatggaaggagaaaaaaattgcggccttagagaggcagaaggaatat
tcagacataatccaagatgaacgtgatgcactgaggaatgaggttttccggctgagggat
gctctaaagaaacatggcatatcccttggatctgaggtgacaacaaatggcgagactgga
aacaacatgactaatggacctgaatgtgtagaatcggctcaagatggaccagctatgagc
gctgacagcatcttagagagatctccagaggatcaggcacctaaaatggacagcacatca
tgcatggaagtggcttattcagaagtaaaaagaactgaagatatggattccagtgcaaga
gcatcatgcagttttgtacagattcaagagtactacagaattcctaaaacaattgaatat
tacaggggtcagtcggtttgtgcggaaaatgtaccagatgaaataatacatgatagtgtg
gtagctcagaataatgttatgctcaaagcagaaaaaaatgcgaacaaacaaaacgagcag
aaggaagaaccttgggtagaggagaacacaagtgtcactgaagacccagaaagtcttttg
agtcgaggtacaaatgaagaacttgcaccatcccaatttattaaagctaacaatcagtat
aagcctacaaaccgaaccggtgaagaaacagcggagaaaatggacctacctagacccact
aaaagctatcaagatccaagaaaagctattcccagcacaaatgtagcaatgaccagctat
ggaaaaggatatctttcttcaagcagtgagcaagagtttgaaacagagctaaaatttgaa
tcaggggctgtgaagagttgcttctttaccatcccagtagaagagaaaggcatcgcttca
tttttagacagctgccaagaagctttgccattagaatttgaagtcgtcaggcatgaggaa
tcagatatggccagagcggcgcaacagggagagacaaattctgctgttgatgacagaaaa
cacaacagcacaaggcttaagaccatgagcaaacaggattgtattgtgtcctaa
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