Silurus meridionalis (southern catfish): 124380098
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Entry
124380098 CDS
T08004
Symbol
rfx7a
Name
(RefSeq) DNA-binding protein RFX7 isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124380098 (rfx7a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Other basic domains
RF-X
124380098 (rfx7a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
124380098
NCBI-ProteinID:
XP_046696820
LinkDB
All DBs
Position
26:complement(11160934..11184964)
Genome browser
AA seq
1495 aa
AA seq
DB search
MAEEQQQQGQHPQPGSSLLPTGLQGTESSALQLKIKNSICKSIQSKVDSILQDVERFTDI
EKLYLYLKLPSGPSSSGSDKISEQSCVSSSRMQQMHAFSWIRNHLEEHTDTSLPKQEVFD
EYKSYCDNLGYHALSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRKKPFIHMPSLP
NLDVHKTGDGCEGFELTGQNSSGEDEVRSAACDLVCEWAQKVLSRQFVSVEDLARFLLNS
HYISTKSVAALTVMTGSPSGAPMSAQSSAFMPTADAHSFQPQVKTLTSPSIDAKQQLQRK
IQKKQQEQKLHSPLPPEAQGRRAERVTTPCASTGIPCGSPALLSPQPTIGIVVTTVPSPV
TVQRSRQLMSPSPVPVATAESKVLPVNFQMVTQSVQPVNRCPKTPQNVTASPVGDRPTRH
RYPQILPKPVTTSAITLRSPSALLITKSSIKTVVPTPKDSSMNLVKMTAISLGPSNSTTS
TTATTARPASAGITSHSDDLQPLTHVRSGSIAAMPLTLSKPGQTTTTPAVNIEMDVVDAA
VRAREAQGGTTAGGTQVERVLKPRAASVPTPLAKMSAESDRQSGNKVNGLLLPIKNNFVA
ASNNNPINSTIYKDLGGQRTSSVSTTNSSTYMTPPKDAPHKEMPSPSPRKRQGLYPDPSL
TPVKKIYISEGNEDAQLSMNIAEKNVSRSESPVEPESKLTSAAGKVMVKHTSSDTTHIPA
FSDSPIGNTDFKTVGRSQSILQGQWEGSSANVKNTTMGTTAVSGPCQDCQVRNTSFQTFN
RPRSISQGQWQGSSTNMNSKPIASRTVSAPGQALLQNKNTQFMQSSSSAVCDLNAVLWNN
DQHDVNQQQIYSQQGTVKNKHHMSSAVMEPPVISQPTATGQLIQMTSDMVGHVSSQPHMG
YFPFNDDDMTQDSIVEELVQMEEQMKMHSSMQSFDNCVDMAIPSQQPAMQNMISSHRATP
SCYNLANTSRTPIHTPTQGTEMIGVGQGLTRESPCSHFAPTTPVDSALGSSCQTPIGTPH
SNCSSGVPPSPVECRNPFAFTPINSSITSYHDGSTISSSPVKPMQRPMATHPDKAKLDWM
NNNYNSSSSNSSNGINILPNYQNLVDNQFRKPHAFAIPGQTYPSPVRHHDIHISRLTPIS
PVQQQVASMANLNKQEGFAVPAPLDNKTSTSSASFRCRSVSPAVRQRNLSGTPNPNVRRY
VVSPFNSPVTPEVLNIFANSQANTSVSICMAQRSQSVPLTVMMQTEVMPMQASGQTNNPK
NITNVLLNKMDSDGDNVVRGLGMNNMPSSYTARMNLSQILEASPVPGFPSSAINSAGSSA
YKYTKPAYLMKNNGGEQISFSRETQEQSVLEENKQLFEDQQNQVLMVPPQHGLQQHQHQQ
SFLFSTTDKDLLDEDLNTVSQLSGQGTKLGTVGSEFPSDMQLTSELSSSMNDLNSLDANL
LFDPASSQQQVQYEEQTLEELKNDPIFQQICSDTVNSASFDWLESKDQATVEMLG
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagagcagcaacagcagggacagcaccctcagcccggatcttctctgcttcct
acaggactgcaaggaacagaaagcagcgcactccagctgaaaataaagaactcgatctgc
aaatctatacagtcgaaggtggacagcatcttgcaagatgtggagaggtttacagacatt
gagaaactttacctctacctcaagctgccctcgggccccagcagcagtggcagtgacaaa
atcagtgaacaaagctgtgtttcttcgagccggatgcagcagatgcatgcgttcagctgg
attcggaatcacctggaagagcacacagatacctcgcttcccaaacaggaagtcttcgat
gaatacaagagctattgtgacaatctgggctatcacgctctcagtgctgccgactttgga
aaaatcatgaagaatgtttttcccaacatgaaggcgcgccggctcggcatgaggggcaaa
tccaaatactgctatagtggcctgaggaagaagccattcattcacatgccgtctcttcca
aatctggatgtacacaaaacaggagatgggtgtgaggggtttgaacttactgggcagaac
tccagcggggaggatgaggttcgctctgctgcctgtgatctggtgtgtgagtgggctcag
aaagtgctgagtcggcagtttgttagtgtggaggacctggcacgcttcctgctgaacagc
cactacatcagcaccaagtctgttgctgctctcactgtaatgacaggatctccttcaggg
gccccaatgtctgctcagtcatctgcattcatgcccacagctgatgcacactcattccag
cctcaggtgaaaacactgacatccccttctatcgatgccaagcagcagctccagagaaag
atccagaaaaagcagcaggaacagaaacttcactccccgcttcctcctgaagctcaggga
agaagggcagaaagggtcactactccatgtgcaagcacaggaatcccatgtggaagcccc
gccttactttcaccacagcccaccatcggcattgtggtaaccacagttcctagcccagtt
acggttcaaagaagtagacagctaatgtctcccagccctgttccggtggcaacagcggaa
agcaaggtgctccctgtcaattttcagatggtcacccaatctgtgcagccagtgaaccgt
tgtccaaagacccctcagaatgtcactgcaagtcctgttggtgatcgtccaactcgccat
cgctacccccaaatactgcctaaaccagtgacaactagcgcaatcacgctacgttcacct
tctgcacttcttatcactaaaagctccattaaaactgttgtaccaacacctaaggacagt
tccatgaacctcgtgaaaatgactgccatatctctggggcccagcaacagcaccaccagc
actactgccaccacagctaggcctgcctctgctggaatcaccagccatagtgatgaccta
caacctcttacacatgtccgtagtggctccatagccgcaatgccattgacactatcaaag
ccaggacaaacaaccacaacaccagcagtcaacatcgagatggatgttgttgatgctgca
gtgcgagctagagaagcacagggtgggacaactgctgggggtactcaagtagaaagagta
cttaaacccagagctgcaagtgtgcctacacctctagctaaaatgtctgcagaatcggac
aggcaatcagggaacaaagttaatggtcttttgctccctattaagaacaattttgtggct
gccagcaataacaatccaattaacagcaccatatataaagacctaggcggtcaaagaacc
agcagtgtttcaacaacaaatagtagcacatacatgacaccacccaaggatgcaccacac
aaggagatgccgtctcccagccctcgcaagagacaaggattatatccagatccaagtctg
acacctgtcaaaaaaatttatatttccgagggaaatgaagatgcacaattgtctatgaat
attgcagaaaagaatgtttccaggtcagagagtcctgttgaaccagaaagtaaacttact
tcagctgctggaaaagttatggtgaagcatacctccagtgatactacccatatccctgca
ttttctgatagtccaattggaaatactgacttcaagactgttggcaggtcccaaagcatc
ttgcagggacaatgggaaggatcctcggctaatgtaaaaaataccactatgggtaccaca
gctgtgagtggcccttgccaagattgtcaagtaaggaatacaagctttcagacctttaac
agaccacgaagcatttcccaaggacagtggcaagggtcttcaactaacatgaacagcaag
ccaatagcttctcgcactgttagcgccccaggtcaggcattgctacaaaacaaaaatact
caattcatgcagtctagctcctctgcagtatgtgatctgaatgctgtgctttggaataat
gatcagcatgatgtcaatcagcaacaaatttattcacagcagggcactgtaaaaaacaag
caccacatgtctagtgctgttatggagcctcctgtgatatctcaacctactgccacaggc
caactgatacagatgacttctgatatggtgggacatgtctcatctcagccccatatgggt
tacttcccatttaatgatgatgatatgactcaggacagtattgtagaagaactagttcag
atggaagaacagatgaaaatgcacagttccatgcagagctttgacaactgtgtggatatg
gcaataccaagtcaacagcctgcaatgcaaaacatgatatccagtcatcgggccacccct
tcttgctacaatttggccaacactagcaggacacctatccacacccccacccaaggcaca
gagatgataggagtggggcagggtttgacccgtgagagcccctgttcacattttgcacct
accacccctgtggacagtgctctgggaagcagctgccaaaccccaattggaacaccacat
tcaaactgcagtagtggtgttccacccagtcctgttgagtgtaggaacccatttgccttt
acccctatcaactccagcatcacaagttaccatgacggaagcactatttcatccagtcca
gtcaagccgatgcaaagaccaatggccacccacccagataaagcgaagttggactggatg
aataataactacaatagcagtagtagcaattctagcaatggaattaatattctgccaaac
taccagaatctggtagataaccagttcagaaaacctcacgcttttgccattcctggccag
acatatccatcaccagtcaggcaccatgacatacacataagtcgcttgacacctatttca
ccagtccagcagcaggtggctagcatggcaaaccttaacaaacaggagggatttgctgtt
ccagcccctcttgataacaaaaccagtacttcctctgcgtcattccgctgccgcagtgtc
agcccagcagtcaggcagcgaaacctaagtggaaccccaaatcccaatgtccgccgttat
gtggtctctcctttcaattcaccagtgacaccggaagtgctgaatatcttcgctaacagt
caagcaaatactagcgttagtatttgcatggcgcagaggagtcagtcagtgccacttact
gtgatgatgcagacagaagtaatgcctatgcaagccagtggtcagacaaacaaccctaaa
aacattacgaatgtcctgctcaacaagatggatagtgatggagataatgtcgtacgtgga
cttggcatgaacaatatgccatccagttacactgctcgtatgaacctctcacaaattctg
gaagcatcccctgttcctggttttccttccagtgccattaactcggctggctcctcggct
tacaaatacacaaagcctgcttatctcatgaagaacaatggaggggagcaaataagcttc
tcaagggagactcaagagcagtcagtcttagaagagaacaagcagctgtttgaagaccag
caaaatcaggtcttgatggttccaccacagcatggcctccagcaacatcagcaccagcag
tctttccttttcagtacaactgataaagacttgttagatgaagacttaaacactgtctca
cagctttcaggccagggaaccaaacttggcactgtgggttcagagtttccgagtgatatg
caactgacctctgaactctccagtagcatgaatgatttaaactctttagatgcaaacctt
ctttttgatccagcatcaagtcagcagcaagtacagtatgaagaacagacactggaagaa
ctaaagaatgacccaatttttcaacagatttgcagcgacactgtaaattctgctagtttt
gattggttggagagcaaggaccaggcaacagtggaaatgttgggttaa
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integrated database retrieval system
