Silurus meridionalis (southern catfish): 124380274
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Entry
124380274 CDS
T08004
Symbol
sv2ca
Name
(RefSeq) synaptic vesicle glycoprotein 2Ca
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124380274 (sv2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124380274 (sv2ca)
Transporters [BR:
smeo02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
124380274 (sv2ca)
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GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
MFS_4
Pentapeptide_4
Pentapeptide_3
Motif
Other DBs
NCBI-GeneID:
124380274
NCBI-ProteinID:
XP_046697075
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All DBs
Position
27:complement(9634530..9661137)
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AA seq
730 aa
AA seq
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MDDIDPRDHQSLMKGAKDMAREAKRQAAKKVSTVVDRASDEYSNSRAYQRFQDEDDGEYY
DPPQGNYTAPDTIDEEGSSDATEGHDDEDEIYEGEYQGIPSESGHRDGHVALGQPVADGL
KDRKELESERQADEEELAQQYELIIQECGHGRFQWQLYFTLGLALMSDGVEVFVVGFVLP
SAETDMCMPDSSAGWLGSIVYIGMMVGALFWGGMSDKVGRRQCLLFCMSINGFFAFLSSF
VQSYGLFLLCRMVAGFGIGGTVPIVFSYYAEVLAREKRGEHLSWLCMFWMIGEIYASAMA
WAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCSVVALTFMPESPRFYLEVGKHDEAW
MILKQIHDTNMRARGQPEKVFTVNRIKIPKQIDEFVEMHPETSNLVSRVIFRVKTELYGI
WLTLMKCFSYPVKDNTIKLAIVWFTLSFGYYGLSVWFPDVIKHLQADEYALKVQRHNNEQ
IEDFTFNFTLENQIHTNGVFINDRFIEIEIKSVTFINTTFQSCHFEDVTSVRSFFRNCTI
IDSFFDDTDIDEYKLINTKVINSLFVYNKTGCQMTFDNDYSAYWVYFVNFLGTLAVLPGN
IVSALLMDKTGRLSMLGFSMILSGISCFFLWFGTSEAMMIGMLCLYNGLSISAWNSLDVV
TVELYPTDRRGTGFGFCNALCKLAAVLGNLIFGSLVSITKAIPILLASSVLVCGGLVGLR
LPDTRSNVLM
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatagacccccgggaccaccagtcccttatgaaaggggctaaggatatggcg
agagaagctaaacggcaagctgctaagaaggtcagcacagtagttgaccgagcatcagat
gagtactccaacagccgtgcctatcaacgcttccaggatgaagatgatggtgaatactat
gacccacctcagggcaactacacagctcctgacaccattgacgaagaaggttctagtgat
gccactgaaggtcacgatgatgaagacgagatctatgagggtgaataccaaggaattccc
tctgaatctgggcacagggatggacatgtagctttggggcagcctgttgcagatggcctt
aaggaccgtaaggagcttgaaagtgaaaggcaagcagatgaggaggagctggcacagcag
tacgagctgatcatccaggagtgtggccatggcaggttccagtggcagctgtacttcacg
cttgggttagctctcatgtctgatggtgtggaggttttcgtagtgggcttcgtgctgccc
agtgctgaaacagatatgtgcatgcctgattcaagcgctggatggctaggtagcattgtg
tacatcgggatgatggtgggggctttgttctggggtggcatgtcggataaagtaggtcgg
cgacagtgtctgcttttctgcatgtccataaacggattctttgccttcctgtcttccttc
gtacaaagctatgggctcttcctgctctgtcgtatggtagcaggctttgggattggtgga
acggttccaattgtgttttcttactatgcggaagtcctggcgagagaaaagcgtggcgag
catctgagctggctctgcatgttttggatgattggggaaatctatgcgtctgccatggcc
tgggctatcatacctcattatggatggagcttcagcatgggttcagcgtatcagttccac
agctggagagtgtttgtagtggtatgtgctcttccatgtgtctgctctgtggtggctctc
accttcatgccagaaagtccaagattctacctagaggtggggaagcatgacgaagcctgg
atgatcctcaagcagattcacgacaccaacatgagagcacgaggacaaccggaaaaagtc
ttcactgtgaatagaattaaaatcccaaagcagattgatgagtttgtggagatgcaccca
gagacaagtaaccttgtgtccagggttattttccgagtgaagacagaactttatgggatt
tggttgacccttatgaagtgtttcagttacccagtgaaagataatactataaagttggcc
attgtgtggtttacactctcatttgggtactacggtttgtctgtgtggttccctgatgtg
attaagcaccttcaggcagatgaatatgctttgaaagtgcagcggcacaataatgagcaa
attgaagacttcactttcaacttcacattggagaaccagatacacaccaatggtgtgttc
atcaatgacagatttatagaaattgaaattaagtcagtgactttcatcaacaccacattt
caaagctgccacttcgaagatgtaacatctgtgagatcattcttccgaaactgcaccatc
attgatagcttcttcgatgacacagatattgacgagtacaaactcataaacacaaaagtc
ataaacagcttgtttgtttacaacaaaacgggttgtcaaatgacatttgataatgactac
agcgcctactgggtctattttgtcaacttccttgggacactggcagtgctaccaggaaac
attgtgtcggcgctgctcatggataaaacagggcgcttatccatgctgggattttccatg
atcctttctgggatcagctgcttctttctgtggtttggcacgagtgaagccatgatgatc
ggaatgctgtgtctttacaatggcctcagtatttctgcctggaactcactcgatgtggtc
acagtagagctgtatcctactgacaggagagggactggtttcggcttctgtaacgccttg
tgtaagctggcagcagtgctagggaacctgatctttggctctctggtcagtataactaaa
gccatcccgatcctgctggcatcctctgtgctggtgtgtggcgggctggtgggactgcgg
cttccggacacaaggtccaacgtcttgatgtag
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