Silurus meridionalis (southern catfish): 124380306
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Entry
124380306 CDS
T08004
Symbol
zgc:65851
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K04572
neurofilament light polypeptide
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124380306 (zgc:65851)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124380306 (zgc:65851)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124380306 (zgc:65851)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
124380306 (zgc:65851)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Motif
Other DBs
NCBI-GeneID:
124380306
NCBI-ProteinID:
XP_046697120
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All DBs
Position
27:complement(1524173..1532906)
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AA seq
550 aa
AA seq
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MSCHSDVYSTSSYRKFFGDSSRVSAAPLRSSAGHRAYGGAYRSRASSGLLAASSARDAAD
LAHSAASTTELKIVRTNEKEQLQGLNDRFAAFIERVRELEQQNRALEAEADALRRSLGSE
PARLRDLYERELREMRERADQLERDRSRAQLENARLGEALTNVQEKLRDEGRRRDEAETE
LQHCRREAEDRALQQHELQKRVESLLHEIEFARKVHDEEVRELQASLQASQISVEMDVGK
PDLTVALKDIRAQYEVLSSRNQQQAEDWYRSKYTSVTGATARDADLMKQTRDELSACRRQ
VQARTLEIESLRNHNEALERQLAEMEDRHSTEIGELQETIAQLDDALHSTKGEMSRHLRE
YQDLLNVKMALDIEIAAYRKLLEGEECRLGNVGVTSIHPTYSAVSYSPGRAYTLGAYMRG
MAKPESEEEEEEKEAEEKEEEEEEGGEEEGEEKEKEEEEEEEEEEEEEGGEEEEQEEEEQ
EEEEEEKRKETKEQEEDKKSEMKEQEEDKKKDKEMEKEKEKDKKSEDKVVESKTESKEEK
TESNKEEKSK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgagttgccatagcgacgtttactccacgagctcctaccggaagttcttcggggactcc
tcacgcgtgtctgcggctccgctgcgctcctcggcgggtcaccgggcttatggaggcgcg
taccggagccgggcgtcctcgggtctcctcgccgcctcctcggcgcgtgacgcggcggat
ctcgcgcactctgcggcgtcgaccaccgagctgaagatcgtgcgcaccaacgagaaggag
cagctgcagggcctcaacgaccgtttcgccgccttcatcgagcgcgtgcgcgagctcgag
cagcagaaccgcgcgctcgaggccgaggctgatgcgctgcgccgcagcctgggctccgag
cccgcgcgcctccgcgacctctacgagcgcgagctgcgcgagatgcgcgagcgcgccgac
cagctggagcgcgaccgcagccgcgcgcagctcgagaacgcgcgcctcggggaggcgctc
acgaacgtccaggagaagctgcgcgacgagggccgccggcgcgacgaggccgagaccgag
ctgcagcactgccgcagggaggcggaggaccgggcgctgcagcagcacgagcttcagaag
agggtggagtcgctgctgcatgagatcgagttcgcgcgcaaagtgcacgatgaggaagtg
cgcgagctgcaggcttcactgcaagcatctcagataagtgtggagatggatgtgggtaaa
cccgatctcacggtggccctgaaggacatccgggcgcagtacgaggtcctgtcttcaagg
aaccagcagcaggcggaagattggtaccgctccaagtataccagcgtgaccggtgcgaca
gcacgcgatgcagaccttatgaaacagaccagagacgagctgagtgcatgccggcgtcag
gttcaggctcgtacgctggagatcgaatccctacgcaatcacaacgaagcgctggagagg
cagctggccgagatggaggatcgtcacagcacggagatcggagagctgcaggagacgatt
gctcagctagatgatgctctgcacagcactaaaggagaaatgtcccgtcacctgcgcgag
tatcaggacctgttgaacgtcaagatggcactagacatcgagatcgctgcctacaggaag
ttactagagggtgaagagtgccgtctgggcaatgtgggcgtgacctcaatccatcccacc
tactccgctgtttcctattcgcccggacgtgcttataccctgggtgcttacatgaggggc
atggccaaacctgagagtgaggaagaagaggaggaaaaggaagcagaggaaaaggaagaa
gaagaagaggaaggaggagaagaagaaggcgaagaaaaggagaaggaggaggaggaggag
gaggaggaagaagaagaagaggaaggaggagaagaagaagagcaggaagaggaagagcag
gaggaggaggaagaagagaaaaggaaggagacaaaggaacaggaagaagacaaaaagagt
gaaatgaaggagcaggaagaagacaagaagaaggacaaggagatggagaaagagaaggag
aaagacaagaagagcgaagacaaagtggtcgagagcaaaaccgagagcaaggaggagaaa
actgaaagcaataaagaagagaagagcaagtaa
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