Silurus meridionalis (southern catfish): 124380323
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Entry
124380323 CDS
T08004
Symbol
si:dkey-3h3.3
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124380323 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124380323 (si:dkey-3h3.3)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124380323 (si:dkey-3h3.3)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124380323 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_10
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-RING_11
zf-C3HC4_5
PSCyt3
ADK_lid
zf-RING_4
DTX3L_a-b
Motif
Other DBs
NCBI-GeneID:
124380323
NCBI-ProteinID:
XP_046697138
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All DBs
Position
27:12235179..12239102
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AA seq
438 aa
AA seq
DB search
MMAESPLPEIFPNVTLLIDSETYEKPWTVLDQVGIKTKEDESLLRVSGSYKDIDKVFMQL
SSMKMKKAQYQSPISERSNVAEHSMNSARLKSASSAQVEPVEVDTFIMHFIQQKCFEELN
KMKRPDVHMQINQKQVTFLSLDTEHGIVHAQMSRERFITFYQKIATGLQSRSYNLDSNQI
QPLLAKFPEFLISTGQSKTDQITLTGKFISLERFEQFLKSPPKRSSTRQTNYTADRSTTT
SSQALQNKTLDKEETCSICLEQMVKSTMKTLEKCKHSFCKGCLKRAFEIKPVCPTCGAIY
GALEGNQPKNGQLKVTYEKYPLPGYENYTTIVIHYIIPNGIQGDEHPNPGQPYKGASRLA
YLPDCSEGKKVLKLLTRAFEQRLIFTVGRSSTTGISNVITWNDIHHKTSRTGGPTAYGYP
DPEYLKRVQEELKVKGIY
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggaatcacccttacctgaaatatttcctaacgtgacccttctcatcgattca
gaaacatatgagaagccatggacagttttggatcaggttggcataaaaacaaaagaagac
gagtcacttctgagggtcagtggaagctataaagacattgataaagtttttatgcaacta
tcatctatgaagatgaaaaaagcccaatatcagagcccaatatcagagaggagcaatgta
gctgagcacagcatgaactcagccaggctgaagtcagcatccagtgcacaagttgaacca
gttgaagttgacactttcattatgcatttcattcaacaaaaatgctttgaagaactcaat
aaaatgaaaaggcctgatgtacacatgcaaataaatcagaaacaggtgacctttctttcc
ctagacacagaacatggtatagtccacgctcaaatgtcaagagaacgctttataactttc
tatcagaagatcgccacaggactgcagagtagatcgtataatttagattcaaaccaaatt
cagccgttgcttgcaaagtttcccgagttcctaatcagcactggacaaagtaaaacagac
caaataaccttgactgggaaattcattagccttgaaagattcgagcagttcttgaaaagc
cctccaaaaagatcttccacaagacaaaccaactacacagctgacaggagcaccacaacc
tccagccaggcattacagaataaaaccttagacaaagaggaaacttgttccatttgtttg
gagcaaatggtgaaatcaacaatgaagactctggagaaatgtaaacactctttctgtaaa
ggctgtttaaagagggctttcgaaattaaacctgtctgtcctacatgtggagctatatac
ggtgcactcgagggaaaccagccgaaaaatggccagttgaaagtcacatatgaaaagtac
cctctccccggctatgaaaactacacaacaatcgtcattcactacatcattccaaatgga
atacagggggatgaacacccaaatccaggccagccctacaaaggtgcttcacgcctggcc
tacttgccagactgctcagaaggaaaaaaagttcttaagctccttacacgagcatttgag
caaaggttaatctttacggttggacgctcgtcaaccactggcataagcaacgtgattact
tggaatgacattcatcacaaaacgtcccgcactggtgggcctactgcgtacggttaccca
gatcctgagtacctgaaacgagtccaagaggagctgaaagtgaaaggaatttactga
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