Silurus meridionalis (southern catfish): 124380338
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Entry
124380338 CDS
T08004
Symbol
brd3b
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain-containing protein 3b
KO
K11721
bromodomain-containing protein 3
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124380338 (brd3b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124380338 (brd3b)
Protein kinases [BR:
smeo01001
]
Serine/threonine kinases: Other
BRD family [OT]
124380338 (brd3b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124380338 (brd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BET
DksA-like_N
Motif
Other DBs
NCBI-GeneID:
124380338
NCBI-ProteinID:
XP_046697171
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All DBs
Position
27:complement(5558025..5576662)
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AA seq
710 aa
AA seq
DB search
MSAVTSPTQAAPSIVNPPPPEVTNPSKPGRKTNQLQYMQNVVVKTLWRHQFAWPFYTPVD
AIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQDFNTMFTNCYIYNKPTDDIVL
MAQALEKIFLQKVAQMPQEEVELLPPPPKGKARKPGAAHAGETPQASALSSTSPSSSCPS
SPPQPPQTPVIAATPVPTITSNVQAVPAAAPMIPSAQPVVKKKGVKRKADTTTPTTCAIT
ASRGESPTPLLESKHSKVISRRESTGRPIKPPKKDLDDGELLQQGNKKSKLSDHLKYCDT
ILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYQDAQSFA
ADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPAEPSSPGGTSATAVVSKS
TGSSESSADSSSSSSDSEEERATRLAELQEQLKAVHEQLAALSQGPVSKPKKKKEKKEKE
KEKEKKKKEKEKDKDKTKAKVEEEKKPKSSQPSKPSQPKKSSTRKPNSTSTTRQPKKGSK
PSAANYESDEEEALPMSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLXDSNPDEIEI
DFETLKPSTLRELERYVKSCLQKKQRKPLPGTGKKSAKTKEELVQEKKKELEKRLQDVSG
QLNNNKKPPKKEKAGSVPGGGPSRLSGSSSSSDTGSSSSSGSSSESSDSD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggtcacatctcccacccaggctgctccctctatagtcaacccgcctccacct
gaagtaacgaaccccagcaagcctggccggaaaaccaaccagctccagtacatgcagaac
gttgtggtgaaaacactgtggaggcatcaatttgcgtggcccttttacacacctgtggat
gccattaaattaaatcttccagactatcataaagtcatcaagaacccaatggacatgggg
acgatcaagaagagacttgagaataattactactggacagctggtgaatgcatgcaggat
ttcaacactatgttcacaaactgttatatatataacaagcctacagatgatattgttctc
atggcccaagccctggaaaaaatcttcctccagaaggtagcacaaatgccccaggaggag
gtggaactgctgccaccacccccaaaaggcaaggcacgcaagcccggtgctgcccatgct
ggagaaactccgcaagcttcggcactgtcctcgacgtccccgtcctcgtcatgtccaagc
tctcctcctcagccacctcaaactcccgtgatcgcagcgacgcctgtaccaaccatcacc
tccaacgtccaggccgttccagcagctgcacccatgatcccaagcgctcagcctgtcgtc
aaaaagaaaggggtaaagcggaaagcggacaccaccacgcccaccacatgcgccatcacg
gccagcagaggcgagtctcccactcccctgctggagtccaaacacagcaaggtgatctcc
aggcgtgagagcaccgggcgacccatcaaacctccgaaaaaggacctggacgacggcgag
ctcctgcagcaggggaacaagaagagcaaactgagcgaccacctcaagtactgtgacacc
atcttaaaagagatgctgtccaagaagcatgccgcctacgcctggcccttttataaacct
gtagacgcagaagctctggaactgcatgactaccatgagatcatcaagcagcctatggac
ctcagtacagtcaaaaaaaaaatggacagcagagaataccaggatgcccagagttttgca
gcagatgttcggttaatgttctcaaattgctataaatacaacccccctgaccacgaggtc
gttgccatggcaaggaaacttcaggatgtgttcgagatgcgtttcgccaagatgccagac
gagccagctgaaccctcgtcccctggaggcacgtctgccacggcggtagtcagtaagagc
acggggagcagcgagagcagcgcggactcctccagctccagctccgactcggaggaggaa
cgagccacccgcctggcagagctgcaggaacagctgaaggctgttcacgaacagctggcc
gctctgtcacagggccctgtgagcaaaccaaagaagaagaaagaaaagaaagaaaaggaa
aaggagaaggagaagaagaagaaggaaaaagagaaggacaaagacaaaaccaaggccaag
gtggaggaagagaaaaagccgaagtcctcgcagccgagcaagccgagtcagccgaagaag
agttcaaccaggaaacccaacagcacgtctactaccaggcaaccgaaaaaaggctccaaa
cccagcgcggcgaattacgagtcagacgaggaggaagcacttcccatgtcgtacgatgaa
aagcggcagctcagcctggacatcaatcgtctccccggtgagaagctgggccgcgtagtg
cacatcatccaatcccgcgagccgtcgctgnncgactccaacccagacgagatcgagatc
gacttcgagacgctcaagccctcgacgctgcgtgagctcgaacgctacgtcaagtcctgt
ttacagaagaagcagcgcaaacctttgccgggcactgggaaaaagagtgccaagactaaa
gaggaactggttcaggaaaagaagaaagagttagaaaagaggctgcaggacgtgagcgga
caactgaacaacaacaagaaaccgcccaaaaaagagaaggcgggctcagtgccagggggc
gggccgtctcggctgagtggcagcagcagttcttccgacacgggcagcagcagctccagc
ggctccagctccgagagcagcgactcggactga
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