Silurus meridionalis (southern catfish): 124380360
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Entry
124380360 CDS
T08004
Symbol
otpb
Name
(RefSeq) homeobox protein orthopedia B isoform X1
KO
K24901
homeobox protein orthopedia
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124380360 (otpb)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
124380360 (otpb)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124380360
NCBI-ProteinID:
XP_046697202
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All DBs
Position
27:complement(7023261..7027518)
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AA seq
334 aa
AA seq
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MHLFIYDSFIEKSECFPCLSVHAMEKTSFWPMIFAGMKDAAAELLGHREALKCRLGADSG
HPGDLSSGPDAVEGATLLPGEDISNGGSNPGGMQQVGAKEQDKQQQQQGSGQSGGQQSQQ
KQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKR
KKTTNVFRAPGTLLPTHSLPQFPAAMGDGLCSFHANDGRWAAAGMAGVSQLQLPPSLGRQ
PSMAQSLSQCSLGGGPPHNSMGLSNGLSSNGSGLQSHLYQPAFPGMVPASLSGPTSASGS
PQLCSSPDSDVWRGSSIASLRRKALEHTVSMSFT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgtttatttatgactcttttatagaaaagtcggaatgtttcccgtgtctgtct
gtgcatgccatggaaaaaacttcattttggccgatgatttttgcagggatgaaggatgct
gcggctgagctgctgggacacagggaggctttaaagtgcagactcggagcagacagcgga
cacccgggcgatctgagctcgggaccggacgcggtcgaaggcgccacgctgctccccggg
gaagatataagcaatggtggatcaaaccccggcggtatgcagcaggtcggcgccaaggag
caagacaaacagcaacagcaacaaggttcgggtcagtcgggtggacagcagagtcagcag
aaacagaaacgacaccggacccgattcacaccggcgcagcttaacgagctggaaagaagc
ttcgcaaaaacccactacccagatatcttcatgagagaggaactggcgctaagaatcgga
ttaacagagtcccgcgtgcaggtatggtttcagaaccgtcgggccaagtggaagaagcgc
aagaagacgacgaacgtgttccgcgctcctggcacgctgctgcccacgcacagtttgccg
cagtttccggctgcaatgggggacggcttgtgctcgttccacgccaacgacgggcggtgg
gccgcggcgggcatggccggggtttctcagctgcagctgcctccatcgctaggtcgccag
ccgtccatggcgcagtcgctgtcgcagtgcagcctgggaggcgggccgccgcacaactcc
atgggcctttccaatggtctgtcgtcgaacggctcgggcctgcagtcacacctgtaccag
cccgcgttccccggtatggtgccagcctcgctttccggcccgaccagtgcgagcggctcg
cctcagctgtgcagctccccggacagtgacgtgtggagaggcagcagcatcgcctccctg
cgccgcaaagcgctcgagcacaccgtctccatgagcttcacctaa
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