KEGG   Silurus meridionalis (southern catfish): 124380409
Entry
124380409         CDS       T08004                                 
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
  KO
K23455  collagen type VIII alpha
Organism
smeo  Silurus meridionalis (southern catfish)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 124380409
NCBI-ProteinID: XP_046697315
LinkDB
Position
3:complement(9269603..9281952)
AA seq 715 aa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NT seq 2148 nt   +upstreamnt  +downstreamnt
atggctgtggttcctttcctggtgattatagtacaagtggtattattaccatctgtatgt
ggaggagcatattacaaaccccatcatcaacagcatcagcctgtacctcatatacctcac
aaaggtataggaaaggaaatgcctcatatgcagtatccaccttacagaaaagaaatgcca
cagatacccatgcatatgaacaaaggcaaggccaaaaaaggtgagaccattcctagaggt
gagcagggtattccaggtgaagttggaccacaaggtcctcaaggaccacaaggaccacca
gggcctcctgggcctaagggaaatggtatcccaggccctccaggaattcaaggccctcct
ggccctccagggttacctggccttggtaaaccaggaatgccaggcatgcaagggaagcca
ggtgaaatgggaccaaaaggagaaaaaggtgaacagggacctggtggggcagaggggcta
ccaggcaggataggaccaccaggtccacctggaccccagggcttactaggtattgggaag
ccaggtggccaaggaccaccaggactgacaggacccaaaggagaaccagggcacaaaggt
cttcctggtcttccagggttgcctggccctaaaggagataaaggaattggatatccaggc
ccacaaggcccaaaaggcccacctgggcctacaggacttcctggacataaaggattgcca
ggggtgggcaagcctggagcacctggtttgccaggacaaccaggtaaacaaggacagcct
ggaccacctggaccacttggcccattaggtccacctggcttagagggcaaacaaggacca
caaggattgcctggcattgggaaaccaggtgaggaaggagtgccgggacagccaggtgcc
ccaggccataaaggactaccagggccaccaggtttgccaggaaagcctggattacctggc
attggaaaaccaggattccctggctcaaagggtgacaaaggaatagggggaccacctggg
cctccaggactaaaaggtgaaaaaggaaatggaggtcaacctggtttggtaggacccaca
ggacccattggtcctcctggccctccaggatcagtaggaaagcctggtgggattggtgca
ccaggacctaagggagatttaggtgaaggcggagcaaagggagaacaagggcctatagga
gatccagggcctacaggaatgccaggccaaccaggtaaacctggtgaggaaggggaacct
gggccacggggaccagctggacctattggtcccaaaggagaggaaggagagaagggtcta
cctgggccccctggccttcctggcctgcctggtcttaaaggagaagggggtgcacttggt
cctgcagggcctcagggacctaaagggattccgggacttgcaggaccaggtggaccgatt
ggaccacctggccctgcggggcctaagggagaagctgggcttcctggcaaggctggttct
ccaggtgagggactccgtggtgctataggccccattggccctcctgggcctcctggccca
ggcggtgctccaggcacggcaggtcacccaggccctcctggtcctccaggaccgcctgga
ccaccagccgtaaaccctgacctcatgggtgttttgcctgagatggggccatccctggat
ggagtaaaggctggtgggtatatgaaaggaaagaacaaaggtaaagctgacataatgggt
tctactggtctggagatgcctgctttcactgctcaactcactacaccctatcctccagtt
ggcacaccagtgatatttgacaagctattgtataatggccggcaaaattacaacccaaaa
actggtgtgttcacctgcgaccttcccggtatctactacttctcatatcatgtgcattgc
aagggatcaaacgtatgggtcgggctgtaccgaaatggagaagctgtgacgtatacatac
gatgaatacaagaagggagttttggaccaggcttctggcagtgctgtggttcccttacag
ccgggagatactgttcacatccagttaccatctgaccaggcatctggactctatgcaggg
caatatgtccactcttctttctctggtttcctactgtaccccatgtaa

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