Silurus meridionalis (southern catfish): 124380464
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Entry
124380464 CDS
T08004
Symbol
hip1rb
Name
(RefSeq) huntingtin interacting protein 1 related b isoform X1
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124380464 (hip1rb)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
124380464 (hip1rb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
CCDC90-like
Motif
Other DBs
NCBI-GeneID:
124380464
NCBI-ProteinID:
XP_046697402
LinkDB
All DBs
Position
27:14574660..14634263
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AA seq
1090 aa
AA seq
DB search
MNSIRQVPSRMKSKMSETSLGEEKDRFERQQLSSISKAINSTETPVKEKHARRIIMGTHR
EKAAHTFWSYAIGLPLSSNAIVSWKFCHVLHKVLRDGHQNTLQDCMRHYSNIAETGTLWG
NTRDKNGYAQLVSLYTKLLCLKLTFHTAHPEIRANLEVTDEVLERTAGTDINNVFQLTVE
VFDYMDTELRLAESVLRQLNTSIAISTLTAGQCKLAPLIQVIQDCSHLYHYTVKLLFKLH
ACLPPDTLQGHRERFHDQFHSLKTFFNKARDMMYFKRLIQIPRLPDSPPNFLRASALAEH
VKPMVIIPDEEEPEEDDEPEPLIDVSEASPVSMASQPQVDIFDQTFGTPDNGFDDRDLQI
DSLKHEIELLRAEIEKIKAEAQRYITQLKSQINSLEAELEEQRVQKQRALVENEQLRMEL
VATRRYSAEQESMQTTFLETEKRAQATELRYNKLKEKHAELVANHAELLRKSADTVKMLS
ATQQTQEEVARTKQQLSFEMERIKQESDMKLEEQKFEMDKLRRDLEVKIGEIQQIKGLLQ
TSEKGSEQLSNSISSVQAEKDHLMRCVSEKEAELSSLKQAAQLKDSSLRHERERSSKELE
QLQGKLKEKLDCEEQLKQKLLDEQFALLQGTVTEAEIMIQDAANKVDDPLHIRCTSSPDY
LVSRAEAALVSVTKLQAGHSHYLKNMEDAGLLLRALTQFSHLTADTIINGSATAHMAPLN
FADRLMENCRACATQSLRFLNDLKSKVSMKGADPASVHVVIQKILQIAQDLRPKGVDVGK
EELGDMVDKEMAATSAAIEEAVRRIDEMMNQARRDTEGVKLEVNERILYSCTDLMKAIHL
LVLASTDLQKEIVESGRGAATVKEFYARNSRWTEGLISAAKAVGWGATQMVDSADKVVLH
TGKYEELIVCSHEIAASTAQLVAASKVKADRGSKKLLSLQQASRHVNEMAANVVASTKTG
QGQIEEKDTMDFSGMSLIKLRKEEMESQVKVLELESMLENERLRLGELRKKHYDIAGVSM
EQLEQDDSALSPALPSSPKPSKPTLMKKPALAQKPNIPTKSMGQSSEAQGPLLSQGHQRP
LLPRKKSAMQ
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgatacggcaggtgccatcacggatgaagagtaaaatgtcggagactagttta
ggagaagaaaaagaccgtttcgaaagacagcagctcagcagcatcagtaaagccattaac
tccactgagacaccagtaaaggagaaacatgctcggagaattatcatgggaactcacaga
gaaaaggcggcgcacactttctggtcctatgctattgggcttcctttgtccagtaatgcc
attgttagctggaaattttgccatgttttacataaagttctacgtgacggccaccaaaac
acactacaagactgtatgagacattacagtaacattgcagagactggaacactgtgggga
aacaccagagataaaaatggatatgcacagcttgtttccctatataccaagctcctctgt
ctgaaactgacattccatactgcacatcctgaaatccgagccaacctggaagtcacagat
gaagtcttggagcgtacagcaggaacggacattaataatgtcttccagcttacagttgag
gtgtttgattacatggatacagagcttcgtcttgctgagtcagttctacgacagctcaat
acttctattgccatctcaacattgacagcagggcagtgtaaattagcaccacttattcag
gtcatccaggactgtagtcatctgtatcactacactgttaagctgctatttaagttacat
gcttgtttaccgcctgatacactccagggccatcgtgaaaggttccatgatcaatttcac
agtctcaagacattttttaataaagcaagagatatgatgtacttcaaacggcttatccag
attccacggctacctgattcccctccaaacttccttcgagcttctgccctagcagagcat
gtaaagcccatggttattatcccagatgaagaggagccagaggaagatgatgagcctgaa
ccactaatagatgtcagtgaggcttctccagtcagcatggcttcccaaccacaggttgac
atatttgatcagacatttgggaccccagataatggctttgatgacagagaccttcagatt
gacagtttaaagcatgaaattgaactacttcgagctgaaattgagaagatcaaagctgag
gctcagcgttatatcactcaactgaaatctcagataaacagtctagaggcagagctggag
gagcagagggtgcaaaaacagcgtgcacttgtagagaacgagcagctacgtatggaactg
gtggctactaggcgatacagtgcagaacaagagtcaatgcagacaacatttttggaaact
gagaagagggctcaagctacggagctacggtataacaagctaaaggagaagcatgcagag
ttggtagccaaccatgcagagttacttaggaagagtgcagacactgtaaagatgttgtca
gccactcagcagacccaggaggaggtggccagaactaaacaacagttatcttttgaaatg
gagaggatcaaacaggagtctgacatgaagttggaggagcaaaagtttgaaatggataaa
ttgagacgggatttggaggtgaaaattggggagatccaacaaataaaagggttattacag
actagtgaaaagggcagtgaacagctgagcaactccatatcctcagtgcaggcagaaaag
gaccacctgatgcggtgtgtgagtgaaaaggaggctgagctatcttctctgaagcaggca
gcccagctaaaggattcctcactccggcacgagagggagaggagcagcaaggagctggaa
cagcttcagggaaaactgaaagagaagcttgactgtgaggaacagttgaagcagaagttg
ttggatgagcagtttgccctgttgcaaggtacagtaactgaggcagaaatcatgattcag
gatgctgcaaacaaagtggatgatcctttgcatatccgctgcaccagttcaccagattac
cttgttagccgtgcagaagcagcgttggtctcagtaactaaattgcaagcgggccactcc
cactatttgaagaatatggaagatgctggtctactgctgagggcgctgacacagttttct
catcttactgctgacaccattatcaatggaagtgcaacagcacacatggcacctctaaat
ttcgctgatcgattgatggagaactgcagagcatgtgccacacaaagcttacgttttcta
aatgacctgaagtctaaagtatccatgaagggtgctgatccagcatctgttcatgtagtg
atacaaaaaatcttgcaaattgcacaggacctgaggccaaaaggagtagatgtcggaaag
gaggagctgggggacatggtagataaagaaatggctgccacttctgctgctatagaggaa
gctgtgaggagaatagatgagatgatgaatcaggccagaagagacactgaaggagtcaag
ctggaagttaatgagagaatactgtatagctgcactgaccttatgaaggctatccatctc
ctggtgttggcatcaaccgacctacagaaggagattgttgaaagtggaaggggtgctgca
acagtgaaggagttttatgcaagaaattctcgctggactgagggtctcatatcagctgcc
aaggcagtgggctggggggcaactcaaatggttgattctgctgataaagtggtgttacac
acgggcaagtacgaagagcttattgtctgttctcatgaaattgcagccagcacagcacaa
cttgttgcagcttccaaggtaaaagcagaccgaggcagtaaaaaattgttgagtcttcag
caagcctctcgccatgtaaatgaaatggctgctaatgtggtagcttcgaccaagacaggc
cagggacagatagaggaaaaagacactatggacttttctgggatgtctctgatcaagttg
aggaaagaggaaatggagtctcaggtgaaggtcctggagctggaaagcatgcttgaaaat
gagcgcctacgacttggggagctacgtaaaaagcactatgatatagcaggggtttctatg
gaacaattagagcaagatgacagtgctctctctccagcgttaccctcctctcccaaacca
tccaaaccaacattaatgaagaaaccagctcttgctcagaaaccaaacattcctacaaaa
agcatgggtcaaagcagtgaagcccaaggaccgctcctgagccagggccatcagagacct
ctactccccagaaaaaaatctgccatgcaatag
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