Silurus meridionalis (southern catfish): 124380501
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Entry
124380501 CDS
T08004
Symbol
mef2cb
Name
(RefSeq) myocyte enhancer factor 2cb isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124380501 (mef2cb)
04371 Apelin signaling pathway
124380501 (mef2cb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124380501 (mef2cb)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
124380501 (mef2cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
124380501
NCBI-ProteinID:
XP_046697508
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All DBs
Position
27:8733729..8786831
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AA seq
479 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKI
NEDIDLMISRQRLCAMPPSNYDMPVSIPVSNQIYSHPGGSLGNHNLGPLAHHGIQRNSMS
PGVTHRPPSAGGLMGADLTTGPGTSAGKDGIPTFYRNGYGNHRNSPGLLVSSGGMNKNMQ
AKSPPPMNLGMNSRKPDLRVLIPPGTKNNMPSINQRINNSQSAQSLATPVVSVATPTLPG
QGMGGYPSAISTSYGTEYSLSSADLSSLSGFSSANTLHLGSMSGWQQQHLQNMQHSALGQ
LGNCTSTHLCQGSNLSLPSTQSLHIKSEPVSPPRDRSSSATPGGYAPPPSHPQQHQAPPQ
QQAPPPQGRSPADSLSSEGSERDDHRADFHSPLGMGRPGLDERDSPSVKRVRLSEGWAT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaaaagattcagatcacgcggattatggacgaacgcaacagacaggtgaca
ttcaccaaaaggaagtttggactgatgaagaaagcctatgagctgagtgtgctatgcgac
tgtgagatcgccctcatcatcttcaacagcaccaacaagctcttccagtacgccagcacc
gacatggacaaagtgttactgaagtacacagagtacaacgagcctcatgagagcaggacc
aattctgacattgtggagacattgagaaagaagggactaaatgggtgtgacagccccgac
ccagatgcagacgattctgttggtcacagcccggagtctgaggacaagtaccgcaaaatc
aacgaggacatagacctaatgatcagcaggcagagactgtgtgccatgcccccttccaac
tatgacatgccagtgtccatcccagtgagtaaccagatctacagccatcctggaggatcc
ctaggcaatcataacctgggtccactggcccatcacggcatacagaggaacagcatgtcc
ccaggtgtcacacacaggcccccgagtgcaggtggtctgatgggtgccgatctcaccaca
ggccctggcaccagtgctggtaaggatggcatccccaccttctacagaaatggctatgga
aaccaccgtaactctcctggattgctagtgtcctctgggggtatgaacaagaacatgcag
gccaagtcgcccccacctatgaacctgggcatgaacagccgaaagcctgacctgcgcgtg
ctcatcccgccaggaaccaagaacaacatgccatcaatcaatcagagaataaacaactcg
cagtccgcacagtcattggccaccccagtggtttctgtggcaacccccactctaccaggc
cagggcatgggtggctacccttcagcgatctccacctcctatggtactgaatattctctc
agcagtgccgacctgtcatctttatctggcttcagcagtgccaacaccctgcacctgggc
tcaatgagtggctggcagcagcagcacctccagaacatgcagcactctgccctcggccag
ctgggaaattgcactagcactcacttatgtcagggttcaaatctctccctgccctctacc
caaagcctgcacatcaagtccgaacctgtttctcctcctagagaccgctccagcagcgcc
acgcctggcggctatgccccgcccccttcccacccgcagcagcaccaggccccaccccag
caacaggctccacccccacagggccgctcaccagctgacagcctgagcagcgagggcagt
gagcgtgatgatcaccgggccgactttcactcgccccttggcatgggccggcctggcctg
gatgagcgcgacagtccctctgtcaagcgagtccgcctttccgagggctgggccacatga
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