Silurus meridionalis (southern catfish): 124380567
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Entry
124380567 CDS
T08004
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124380567 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124380567 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124380567 (usp30)
04121 Ubiquitin system [BR:
smeo04121
]
124380567 (usp30)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124380567 (usp30)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124380567 (usp30)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
124380567 (usp30)
Ubiquitin system [BR:
smeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124380567 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
124380567
NCBI-ProteinID:
XP_046697631
LinkDB
All DBs
Position
27:complement(16466509..16471885)
Genome browser
AA seq
493 aa
AA seq
DB search
MSWSAQEATDELLREFFRARSSGRNRIMKNWGVIGGITAAIAVGVYVLWGPNTDRKKRSK
GMVPGLLNLGNTCFLNALLQGLATCPSLISWLQNFSTHSTSRLTNTETDVQKTDTETDAK
MDTQRDTRVSQTLLQLLTALSSPEPRENEVLDAGCLLEALRLYRWHISSFEEQDAHELFH
VLTSSLEEEREQHPRVAHLFDMETLEKSAEVNEDSVRCWSRGPLHPIPNMWRMQHPFHGR
LTSYMACKCCERQSPVRYDSFDSLSLSIPAVQWGRPITLDQCLQHFISSETIKEVECENC
TKKQAETRDSQALESQRRTFIKQLKLGKLPQCLCIHLQRLTWSPEGAPIKRHEHVQFSEY
LSMDRYKHSSATRRLCKPTAVETRDATLANGVAPEHHNNNKPTSNGSISSVFLRPPQLDL
GHVFSSSEYLFRLTAVLVHHGDTHSGHFVTYRRGPPTSNPQWLWVSDESVRQASLQEVFS
SRAYLLFYERVRT
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggagcgcccaggaggccacggacgagctgctccgggagtttttccgcgcacgg
tcctctggcaggaataggatcatgaagaactggggtgtgatcggaggcatcaccgctgcc
atagcggtgggtgtttacgtcctgtggggtcccaacacagacaggaagaagaggagtaaa
ggcatggtgcccgggctgttaaacctgggaaacacatgcttcctgaacgctctgctgcag
ggtctggcaacgtgtccttctctcatcagctggctccagaacttcagcacccacagcacc
tcccgtctcacaaacacagagacagacgttcagaagacagacactgagacagacgctaag
atggacacgcagagggacacgcgggtttcccaaaccctcttgcagctgcttacagctctg
tccagtcccgaaccaagagagaacgaagttctggatgcaggatgtctgttagaagctctt
cgtctttacagatggcacatcagctctttcgaggaacaggacgctcacgagcttttccac
gtcctcacgtcgtccttggaggaggagcgtgagcagcacccgagagtcgcgcacctgttt
gacatggagacgctggagaaatcggcagaggtgaacgaggactctgttagatgttggagc
cgagggcctctgcaccccattcccaacatgtggaggatgcaacacccgttccacggacgc
ctaaccagctatatggcctgcaaatgctgcgagcgccagagtccggtgcgttacgattca
ttcgacagcctctcgctctccattcctgctgttcagtggggtcgaccgattactctggat
cagtgtctgcagcatttcatctcctcagaaaccattaaagaggtggagtgtgagaactgc
accaagaaacaggctgagactagggacagtcaggccctggagagccagaggaggacattc
ataaagcaactaaaactcggaaagctcccccagtgtttgtgcatccacctgcagagactc
acctggtctccagagggcgctcccattaagcggcacgagcacgtccagttctccgagtac
ctcagcatggaccggtataaacacagcagcgctacacgcagactatgcaaacccacggct
gtagaaacgcgcgacgcaaccctcgccaacggagtcgccccagagcaccacaacaacaat
aagccgacgtcgaacggtagcatctcgtcagtttttctacgtccccctcagctcgaccta
gggcacgtcttcagctcgtcggagtacctgttccggctgacggcggtgctcgtgcaccac
ggcgacacgcactcggggcacttcgtcacgtaccgcagaggcccgccgacatccaacccg
cagtggctgtgggtttcggacgagtccgtgcgccaggccagcctgcaggaggtcttctcc
tccagagcatacctgctgttctacgagcgagtgcgcacttga
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